Table 1 Comparisons between predictions and high-confidence gene sets for Sc. pombe and S. cerevisiae
Nucleotide | Exon | Intron | Gene | |||||
|---|---|---|---|---|---|---|---|---|
Sn | Sp | Sn | Sp | Sn | Sp | Sn | Sp | |
Sc. pombe (1898/5124 genes in high-confidence set) | ||||||||
CodingQuarry | 99.3 | 99.7 | 93.4 | 93.6 | 94.5 | 96.7 | 91.3 | 89.0 |
AUGUSTUS | 99.2 | 99.1 | 92.0 | 91.4 | 95.7 | 92.6 | 86.9 | 88.9 |
TransDecoder | 95.4 | 99.3 | 84.5 | 86.3 | 88.5 | 97.0 | 80.2 | 73.5 |
S. cerevisiae (5206/6575 genes in high-confidence set) | ||||||||
CodingQuarry | 99.2 | 99.8 | 90.0 | 90.0 | 79.0 | 67.6 | 90.4 | 91.1 |
AUGUSTUS | 97.5 | 99.7 | 84.7 | 90.9 | 74.4 | 77.0 | 85.0 | 91.5 |
TransDecoder | 92.2 | 99.5 | 79.9 | 74.8 | 73.9 | 67.4 | 80.1 | 68.0 |