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Table 4 D. rerio proteins with ≥ 4 contigs aligning to ≥ 80% of the D. rerio sequence

From: The central nervous system transcriptome of the weakly electric brown ghost knifefish (Apteronotus leptorhynchus): de novo assembly, annotation, and proteomics validation

D. rerio reference protein (UniProt ID) Protein name # Contigs in assembly # of D.rerio genes
CALM_DANRE Calmodulin (CaM) 7 6
E7F3G4_DANRE Uncharacterized protein 6 1
H33_DANRE Histone H3.3 5 4
E7FDA5_DANRE Uncharacterized protein 5 1
A2BHK0_DANRE Uncharacterized protein 4 1
F1R8F5_DANRE Uncharacterized protein (fragment) 4 1
F8W544_DANRE Phosphatidylinositol transfer protein, alpha b 4 1
Q6P2T9_DANRE Cd63 antigen 4 1
Q6PBX6_DANRE Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) 4 1
  1. Multiple sequence alignment of assembly sequences to phosphatidylinositol transfer protein (F8W544_DANRE) is shown in Figure 6B. Similarly, a multiple sequence alignment of assembly sequences compared to uncharacterized D. rerio protein (A2BHK0) is shown in Additional file 8: Figure S3.