(a) N. vitripennis | Total transcriptome | Total DE transcripts | DE transcripts per time point | ||||||
---|---|---|---|---|---|---|---|---|---|
 | Transcripts | Length | Transcripts | Length | 0 h | 4 h | 24 h | ||
protein-coding (sense) | 22760 | 75.3% | 4076 | 2175 | 88.5% | 3819 | 602 | 1109 | 1205 |
antisense | 1525 | 5.0% | Â | 76 | 3.1% | Â | 29 | 41 | 37 |
to a protein | 730 | 2.4% | 2337 | 44 | 1.8% | 3236 | 14 | 24 | 23 |
to a sense transcript | 596 | 2.0% | 1162 | 26 | 1.1% | 802 | 13 | 16 | 10 |
to both | 199 | 0.7% | Â | 6 | 0.2% | Â | 2 | 1 | 4 |
long non-coding RNA | 3245 | 10.7% | 1342 | 112 | 4.6% | 1512 | 43 | 55 | 53 |
with a putative ORF | 220 | 0.7% | Â | 10 | 0.4% | Â | 2 | 4 | 7 |
unknown | 2693 | 8.9% | 946 | 95 | 3.9% | 1158 | 43 | 50 | 38 |
with a putative ORF | 81 | 0.3% | Â | 4 | 0.2% | Â | 1 | 1 | 2 |
Total | 30223 | Â | 3389 | 2458 | Â | 3565 | 717 | 1255 | 1333 |
(b) N. giraulti | Â | Â | Â | Â | Â | Â | Â | Â | Â |
protein-coding (sense) | 23806 | 80.3% | 4004 | 2008 | 90.5% | 3336 | 340 | 854 | 1358 |
antisense | 719 | 2.4% | Â | 30 | 1.4% | Â | 15 | 16 | 14 |
to a protein | 154 | 0.5% | 1165 | 4 | 0.2% | 1254 | 4 | 1 | 0 |
to a sense transcript | 529 | 1.8% | 846 | 24 | 1.1% | 561 | 11 | 14 | 12 |
to both | 36 | 0.1% | Â | 2 | 0.1% | Â | 0 | 1 | 2 |
long non-coding RNA | 2244 | 7.6% | 1381 | 90 | 4.1% | 1398 | 20 | 32 | 57 |
with a putative ORF | 190 | 0.6% | Â | 12 | 0.5% | Â | 2 | 4 | 9 |
unknown | 2872 | 9.7% | 972 | 92 | 4.1% | 1138 | 35 | 43 | 43 |
with a putative ORF | 92 | 0.3% | Â | 2 | 0.1% | Â | 2 | 0 | 0 |
Total | 29641 | Â | 3437 | 2220 | Â | 3126 | 410 | 945 | 1472 |