Skip to main content

Table 1 Summary of reads in Cry1Ab susceptible strain (ACB-BtS) and resistant strain (ACB-AbR) of Ostrinia furnacalis transcriptomes

From: Transcriptome differences between Cry1Ab resistant and susceptible strains of Asian corn borer

  ACB-BtS-1 ACB-BtS-2 ACB-AbR-1 ACB-AbR-2
Total clean nucleotides (nt) 4,631,663,700 4,662,124,200 4,765,847,040 4,920,077,340
Total clean reads 51,462,903 51,801,380 52,953,856 54,667,526
GC percentage (%) 49.50 50.04 48.80 49.22
Total number of contigs 102,236 91,311 88,634 84,209
Mean length of contigs (nt) 348 332 366 607
Total number of unigene 63,032 53,710 57,770 54,468
Mean length of unigene (nt) 607 580 629 613
Distinct clusters 14,628 11,426 12,912 11,397
Distinct singletons 48,350 42,284 44,858 43,071
SNP type A - G 36,334 34,649 25,361 23,984
C - T 36,868 35,104 25,385 24,441
A - C 9,884 8,980 7,092 6,778
A - T 13,589 12,324 9,887 9,283
C - G 8,141 7,147 5,797 5,515
G - T 9,676 8,866 6,855 6,464
\