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Table 2 Non-synonymous changes in putative Cry toxin receptors*

From: Transcriptome differences between Cry1Ab resistant and susceptible strains of Asian corn borer

Receptor

Gene ID

Position cDNA

Reference

ACB-BtS-1

ACB-BtS-2

ACB-AbR-1

ACB-AbR-2

AA change

Base

Number

Base

Number

Base

Number

Base

Number

APN1

Unigene4279

1849

G

G

231

G

164

A

252

A

248

A > T

APN1

CL3709.Contig2

824

G

G

150

G

231

A

218

A

255

C > Y

 

CL3709.Contig2

1010

A

A

108

A

85

G

255

G

255

N > S

 

CL3709.Contig2

1034

T

T

116

T

99

G

254

G

255

V > G

 

CL3709.Contig2

1124

A

A

31

A

31

G

34

G

29

D > G

APN1

CL3709.Contig5

774

T

T

26

T

17

C

110

C

227

G > G

APN1

CL3709.Contig8

171

A

G

11

G

8

A

11

A

27

S > S

APN2

Unigene9047

479

G

A

85

A

45

G

129

G

145

C > Y

 

Unigene9047

650

G

A

35

A

25

G

81

G

161

R > P

 

Unigene9047

827

G

C

26

C

13

G

77

G

178

W > S

APN3

CL1804.Contig3

2998

T

C

33

C

23

T

76

T

30

S > P

APN3

CL6793.Contig1

754

A

A

12

A

16

G

12

G

25

N > D

 

CL6793.Contig1

775

G

G

19

G

18

A

20

A

22

A > T

 

CL6793.Contig1

1174

G

G

23

G

22

A

22

A

22

E > K

APN3

CL9145.Contig1

1303

T

T

41

T

21

C

37

C

81

S > P

APN3

Unigene11364

688

G

G

20

G

24

A

45

A

67

G > S

APN3

Unigene431

1249

G

G

16

G

15

A

34

A

37

V > I

 

Unigene431

1351

A

A

23

A

23

C

42

C

37

N > H

APN3

Unigene5966

134

T

T

25

T

8

A

36

A

41

F > Y

APN7

Unigene12395

521

T

T

41

T

20

C

41

C

64

I > T

 

Unigene12395

805

G

G

92

G

47

A

131

A

147

V > I

 

Unigene12395

1268

C

C

66

C

24

T

103

T

104

P > L

 

Unigene12395

1381

T

T

229

T

137

C

185

C

255

Q > Q

APN12

Unigene3586

1146

T

T

22

T

29

G

8

G

8

S > S

APN7

Unigene887

243

T

C

129

C

68

T

74

T

87

V > V

 

Unigene887

252

T

C

117

C

61

T

78

T

88

D > D

 

Unigene887

261

C

T

117

T

62

C

83

C

93

N > N

 

Unigene887

270

T

C

108

C

62

T

82

T

93

C > C

Cadherin-like protein

CL8807.Contig8

2798

C

T

56

T

33

C

62

C

54

P > P

CL8807.Contig8

3110

G

T

149

T

68

G

127

G

76

V > G

Cadherin-like protein

Unigene3408

1368

T

A

166

A

202

T

171

T

159

G > V

Unigene3408

1934

A

A

161

A

227

T

254

T

254

R > R

ALP

CL2676.Contig2

474

A

G

8

G

4

A

31

A

25

N > I

ALP

CL944.Contig2

2955

C

T

43

T

33

C

17

C

21

F > L

  1. *Position: the position of SNP existed in a certain Unigene; Base: best nucleotide covering the position; Number: number of the best nucleotide on the certain position; AA change: amino acid change.
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BMC Genomics

ISSN: 1471-2164

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