Construction of a high density SNP linkage map of kelp (Saccharina japonica) by sequencing Taq I site associated DNA and mapping of a sex determining locus

Table 1 The characteristics of the linkage map constructed in this study

LG	No. of		Space (cM)			Length (cM)
LG	Markers	Loci	Max.	Min.	Avr.	Cal.	Rev.1	Rev.2
1	308	304	5.123	0.001	0.195	58.913	59.638	59.303
2	279	262	9.846	0.001	0.356	92.619	93.344	93.331
3	278	276	6.530	0.001	0.226	62.056	62.781	62.509
4	268	268	8.258	0.001	0.254	67.532	68.257	68.040
5	252	249	13.957	0.001	0.351	86.804	87.529	87.507
6	227	225	5.008	0.001	0.250	55.674	56.399	56.173
7	220	216	6.874	0.001	0.244	52.262	52.987	52.750
8	217	211	8.349	0.001	0.289	60.329	61.054	60.906
9	197	197	4.893	0.001	0.353	68.765	69.490	69.470
10	192	192	6.211	0.001	0.463	87.906	88.631	88.831
11	190	188	14.969	0.001	0.340	63.319	64.044	64.000
12	183	178	14.209	0.001	0.311	54.736	55.461	55.358
13	168	169	4.506	0.001	0.335	56.004	56.729	56.675
14	167	165	6.576	0.001	0.326	53.105	53.830	53.757
15	166	166	7.178	0.003	0.369	60.478	61.203	61.216
16	137	138	7.021	0.001	0.376	51.134	51.859	51.886
17	136	137	5.583	0.002	0.478	64.559	65.284	65.515
18	137	134	8.914	0.001	0.411	54.272	54.997	55.094
19	130	130	6.799	0.001	0.485	62.051	62.776	63.021
20	128	128	10.776	0.001	0.422	53.204	53.929	54.049
21	125	126	10.013	0.001	0.551	68.287	69.012	69.388
22	124	124	7.900	0.001	0.380	46.314	47.039	47.073
23	124	123	7.471	0.001	0.436	52.733	53.458	53.605
24	121	122	13.093	0.001	0.387	46.385	47.110	47.158
25	104	104	14.271	0.001	0.556	56.689	57.414	57.801
26	96	96	3.828	0.004	0.240	22.565	23.290	23.045
27	85	86	8.327	0.002	0.685	57.517	58.242	58.886
28	84	85	7.183	0.002	0.601	49.865	50.590	51.067
29	82	83	9.39	0.002	0.759	61.439	62.164	62.956
30	40	41	14.250	0.025	1.174	45.786	46.511	48.134
31	29	29	2.886	0.003	0.350	9.445	10.170	10.145
Total	4994	4922	14.969	0.001	0.362	1782.747	1805.222	1808.649

LG, linkage group; Loci refer to genetic ones, not sequence tagged physical RAD loci; Max, maximum; Min, minimum; Avr., Average; Cal., calculated length of a linkage group; Rev. 1, the length of a linkage group revised with the method of Fishman et al. [80]; Rev. 2, the length of a linkage group revised with the method of Chakravarti et al. [81].

ISSN: 1471-2164