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Table 2 Representative differentially expressed genes involved in carbohydrate and lipid metabolism in Ls, SBs, and An-MBs

From: Comparative transcriptome analysis reveals carbohydrate and lipid metabolism blocks in Brassica napus L. male sterility induced by the chemical hybridization agent monosulfuron ester sodium

ProbeName AGI Symble Short description Location* Fold change (MES/mock)
Ls SBs An-MBs
C-compound and carbohydrate metabolism
A_46_P058226 AT5G51820 PGM Phosphoglucomutase plastid −3.1 - -
A_46_P255759 AT5G64860 DPE1 Disproportionating enzyme plastid −2.6 - -
A_46_P205459 AT5G48300 AGP ADP glucose pyrophosphorylase 1   −2.6 - -
A_46_P028531 AT3G46970 PHS2 Alpha-glucan phosphorylase 2   −2.2 - -
A_46_P178359 AT3G60750   Transketolase plastid −3.6 - -
A_46_P005266 AT2G05790   O-Glycosyl hydrolases family 17 protein   −3.1 - -
A_46_P231464 AT3G48740   Sweet protein 11   −3.3 - -
A_46_P140554 AT4G39800 MIPS1 Myo-inositol-1-phosphate synthase 1   - −4.4 -
A_46_P352875 AT5G08380 AGAL1 Alpha-galactosidase 1   - 2.8 -
A_46_P050626 AT3G62410 CP12-2 CP12 domain-containing protein 2 plastid - - 7.9
Cell wall
A_46_P147824 AT5G49360 BXL1 Beta-xylosidase 1   2.7 - -
A_46_P289908 AT3G19450 CAD4 GroES-like zinc-binding alcohol dehydrogenase family protein   −2.4 - -
A_46_P259534 AT5G49360 BXL1 Beta-xylosidase 1   - −39.0 -
A_46_P165304 AT5G17200   Pectin lyase-like superfamily protein   - −602.8 -
A_46_P132309 AT3G62170 VGDH2 VANGUARD 1 homolog 2 cell wall - - −10273.7
A_46_P224439 AT3G07840   Pectin lyase-like superfamily protein   - - −6800.5
A_46_P132729 AT1G69940 PPME1 Pectin lyase-like superfamily protein cell wall - - −5579.7
A_46_P141564 AT5G48140   Pectin lyase-like superfamily protein   - - −4648.8
A_46_P058846 AT4G31370 FLA5 FASCICLIN-like arabinogalactan protein 5 precursor   - - −2337.3
A_46_P074236 AT2G47030 VGDH1 Plant invertase/pectin methylesterase inhibitor cell wall - - −1832.3
A_46_P302240 AT2G47040 VGD1 Plant invertase/pectin methylesterase inhibitor cell wall - - −319.9
A_46_P133334 AT1G02790 PGA4 Polygalacturonase 4   - - −30.0
A_46_P371475 AT3G07830   Pectin lyase-like superfamily protein   - - −22.66
A_46_P172054 AT1G63180 UGE3 UDP-D-glucose/UDP-D-galactose 4-epimerase 3   - - −19.5
A_46_P154974 AT4G30270 XTH24 Xyloglucan endotransglucosylase/hydrolase 24 cell wall - - 24.1
Lipid, fatty acid and isoprenoid metabolism
A_46_P291948 AT1G45201 TLL1 Triacylglycerol lipase-like 1   −3.5 - -
A_46_P011846 AT5G48880 KAT5 Peroxisomal 3-keto-acyl-CoA thiolase 2 mitochondrion - −5.9 -
A_46_P149169 AT3G61200   Thioesterase superfamily protein   - −2.4 -
A_46_P162474 AT3G18280   Bifunctional inhibitor/lipid-transfer protein   - 2.0 -
A_46_P003226 AT1G20130   GDSL-like Lipase/Acylhydrolase superfamily protein plastid - 2.8 -
A_46_P239719 AT3G02040 SRG3 Senescence-related gene 3 plastid - 9.7 -
A_46_P026421 AT2G25890   Oleosin family protein   - - −642.5
A_46_P109549 AT3G23510   Cyclopropane-fatty-acyl-phospholipid synthase   - - −9.9
A_46_P311390 AT4G35790 PLDDELTA Phospholipase D delta   - - 2.2
A_46_P095591 AT3G50660 CYP90B1 Cytochrome P450 superfamily protein   - - 2.3
A_46_P357630 AT3G27660 OLEO4 Oleosin 4   - - 4.6
A_46_P182574 AT1G30040 GA2OX2 Gibberellin 2-oxidase   - - 4.7
  1. *the localization information was from MIPS (Munich Information Center for Protein Sequences) website. Fold change was calculated between MES-treated plants and mock-treated plants; Ls, SBs, and An-MBs represents leaves, small buds, and anthers of middle buds, respectively; “-” represents that the gene was not significantly and differentially expressed in the specific tissue between the MES-treated and mock-treated plants. All the carbohydrate, cell wall, and lipid metabolism, and cellular transport related genes identified in this study were deposited in Additional file 6.