Table 1 Summary of the nine genes selected by discriminant analysis
From: Gene expression profiles in Rana pirica tadpoles following exposure to a predation threat
Gene no | Probe set ID | [−Salam]/[cont] | [−Drago]/[cont] | [Salam]/[cont] | [Drago]/[cont] | Gene symbol | Gene title | Accession no. | Gene ontology (GO ID : GO Term) |
|---|---|---|---|---|---|---|---|---|---|
Fold change | Fold change | Fold change | Fold change | ||||||
Regulation | Regulation | Regulation | Regulation | ||||||
①| Xl.5177.1.S1_at | −3.3129547 | 1.3858212 | 1.3897077 | 1.2546494 | elavl1-a | ELAV-like 1 | NM_001090609 | 0000166: nucleotide binding |
down | up | up | up | 0003676: nucleic acid binding | |||||
0003723: RNA binding | |||||||||
② | Xl.20056.1.S1_a_at | −6.17049 | −1.300266 | −1.1079731 | −1.3633791 | mettl7a | Methyltransferase like 7A | NM_001092436 | 0008152: metabolic process |
down | down | down | down | 0008168: methyltransferase activity | |||||
③ | Xl.19782.1.A1_s_at | −6.9813504 | −1.8626844 | −1.3669766 | 1.3013937 | dpm1 | Dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit | NM_001095996 | 0006506: GPI anchor biosynthetic process |
down | down | down | up | 0035268: protein amino acid mannosylation | |||||
0035269: protein amino acid O-linked mannosylation | |||||||||
0005789: endoplasmic reticulum membrane | |||||||||
0004169: dolichyl-phosphate-mannose-protein mannosyltransferase activity | |||||||||
0004582: dolichyl-phosphate beta-D-mannosyltransferase activity | |||||||||
④ | Xl.6592.1.A1_at | −1.3107206 | 4.32105 | 2.4610617 | 8.463081 | lamb1 | Laminin subunit beta-1-like (LOC100495516) | XM_002933094 | |
down | up | up | up | ||||||
⑤ | Xl.318.1.S1_at | 1.1725949 | −1.132029 | 1.4655828 | 4.5488386 | grem1 | Gremlin 1 | NM_001090277 | 0005576: extracellular region |
up | down | up | up | 0005615: extracellular space | |||||
0005125: cytokine activity | |||||||||
⑥ | Xl.12934.1.A1_at | 1.4139103 | 1.6579978 | −1.3287517 | 1.1197512 | bcor | BCL6 co-repressor-like 1 | NM_001142070 | |
up | up | down | up | ||||||
⑦ | Xl.15257.1.A1_at | 3.5753617 | −2.833272 | −1.2125118 | −1.9222058 | MGC130975 | Hypothetical protein MGC130975 | NM_001096245 | |
up | down | down | down | ||||||
⑧ | Xl.15847.2.A1_at | −1.095607 | −4.3573484 | −4.801005 | −2.5903695 | rhno1 | RAD9-HUS1-RAD1 interacting nuclear orphan 1 | BC170052 | |
down | down | down | down | ||||||
⑨ | Xl.4605.1.A1_at | 1.0614563 | −1.1746231 | 10.257936 | −1.5519288 | EST | BM261602 | ||
up | down | up | down |