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Table 3 The differentially-expressed transcripts involved in lignin biosynthesis

From: Transcript profiling of Populus tomentosa genes in normal, tension, and opposite wood by RNA-seq

Gene id Enzyme family Gene name log 2 FC(NW/OW) log 2 FC(NW/TW) Phytozome ATG
POPTR_0001s07400 4CL Pt-4CL3 4.27 4.63 AT3G21240.1
POPTR_0003s18720 Pt-4CL5 6.52 7.03 AT3G21240.1
POPTR_0006s03180 C3H Pt-C3H3 3.43 3.83 AT2G40890.1
POPTR_0013s15380 C4H Pt-C4H1 3.20 4.47 AT2G30490.1
POPTR_0019s15110 Pt-C4H2 1.62 2.40 AT2G30490.1
POPTR_0009s09870 CAD Pt-CAD1 2.08 1.68 AT3G19450.1
POPTR_0005s11950 CAld5H Pt-CAld5H1 6.00 4.64 AT4G36220.1
POPTR_0007s13720 Pt-CAld5H2 5.34 4.22 AT4G36220.1
POPTR_0009s10270 CCoAOMT Pt-CCoAOMT1 2.57 3.25 AT4G34050.1
POPTR_0001s31220 Pt-CCoAOMT2 2.62 3.87 AT4G34050.1
POPTR_0003s17980 CCR Pt-CC-2 1.38 1.53 AT1G15950.1
POPTR_0012s00670 COMT Pt-COMT2 4.04 3.94 AT5G54160.1
POPTR_0003s18210 HCT Pt-HCT1 2.90 3.75 AT5G48930.1
POPTR_0001s03440 Pt-HCT6 5.48 5.14 AT5G48930.1
POPTR_0002s11880 TFs Pt-LIM1 3.84 4.23 AT1G10200.1
POPTR_0014s01590 Pt-LIM2 1.16 1.08 AT1G10200.1
POPTR_0015s05130 Pt-MYB090 2.92 2.63 AT1G17950.1
POPTR_0009s13640 Pt-MYB156 3.47 3.77 AT4G38620.1
POPTR_0012s03650 Pt-MYB167 1.90 2.09 AT1G17950.1
POPTR_0004s18020 Pt-MYB221 2.91 3.86 AT4G38620.1
POPTR_0006s12870 PAL Pt-PAL1 2.15 5.53 AT2G37040.1
POPTR_0008s03810 Pt-PAL2 3.87 5.63 AT2G37040.1
POPTR_0016s09230 Pt-PAL3 1.15 4.35 AT2G37040.1
POPTR_0010s23100 Pt-PAL4 3.86 4.52 AT2G37040.1
POPTR_0004s01510 Peroxidase Pt-PO1 3.75 2.25 AT4G21960.1
POPTR_0006s13190 Pt-PO2 2.44 3.13 AT2G37130.1