Table 4 Genes discussed in the text associated to high sensitivity to WLT and FB
Function specific process | Chillpeach ID | Unigene annotation | Arab AGI | Arab gene symbol | Hormone signaling | Sugar signaling/ partioning | Hormone and secondary metabolite biosynthesis regulation | Cell wall and cytoesqueleton related | Cell polarity |
|---|---|---|---|---|---|---|---|---|---|
k-means 1. Associated with high sensitivity to WLT | |||||||||
Energy production | |||||||||
| Â | Plasma membrane ATP production | PPN027C11 | Plasma membrane proton ATPase | AT1G17260 | AHA10 | Â | Â | PA transport and polymerization | Â |
RNA transcription regulation | |||||||||
| Â | b-HLH family | PPN080F10 | Prf interactor 30137 | AT2G27230 | LHW | AUX signaling | Â | Â | VN establishment, maintenance, cell number and pattern |
| Â | HB-family | PPN069A12 | BEL1-like homeodomain transcription factor | AT2G35940 | BLH1 | Â | Â | Â | Â |
Signal transduction pathway | |||||||||
| Â | AUX signaling/ AUX receptor E3 ubiquitin ligase SFC-TIR | PPN078E01 | Transport inhibitor response 1 protein | AT3G62980 | TIR1 | AUX nuclear signaling | Â | Â | Â |
| Â | AUX signaling/ Nuclear signaling pathway | PPN078G01 | Putative auxin-resistance protein | AT1G05180 | AXR1 | AUX nuclear signaling | Â | Â | Â |
| Â | Calcium signaling/ Calcium sensor-transducer | PPN027B08 | Calcium-dependent protein kinase | AT3G57530 | CPK32 | ABA | Â | Â | Â |
| Â | Calcium signaling/ Calcium signal transducer | PPN013H01 | Serine/ threonine kinase | AT5G58380 | CIPK10/ SIP1/ SNRK3.8 | ABA | Â | Â | Â |
| Â | Â | PPN020F10 | CBL-interacting protein kinase | AT4G30960 | SNRK3.14/ CIPK6/ SIP3 | ABA | sucrose signaling | Â | Â |
| Â | ET signaling | PPN057C10 | Ethylene signaling protein | AT5G03280 | EIN2 | ABA; positive regulator of ET signaling | Â | Ethylene biosynthesis; positive regulator of ACS type I and negative regulator of ACS type II | VN cell division regulation |
| Â | ET signaling/ Culin E3 ubiquitin ligase | PPN020G10 | Ethylene-overproduction protein 1 | AT3G51770 | ETO1 | Â | Â | repressor of ET biosynthesis (inhibits type II ACS) | VN cell division |
| Â | Phosphorylation cascades/ MAPK | PPN020H02 | Mitogen-activated protein kinase 4 | AT4G01370 | MPK4 | Â | Â | Â | Negative regulator of microtubule structure and stability; negative regulate MAP65-1 |
| Â | Phosphorylation cascades/ metabolic switch | PPN008G11 | AKIN gamma | AT3G48530 | KING1 | ABA | Sucrose signaling | Â | Â |
|  | Phosphorylation cascades/ PP2A | PPN037E11 | Ser/thr protein phosphatase 2A regulatory subunit B’ gamma isoform | AT4G15415 | ATB’GAMMA |  |  | Yang Cycle regulation |  |
Transport | |||||||||
| Â | Carbohydrate transport | PPN025D11 | SLT1 protein | AT3G12570 | FYD | Â | Sugar partioning and homeostasis | Â | Â |
| Â | Â | PPN078G04 | Putative membrane transporter | AT2G43330 | INT1 | Â | Sugar partioning and homeostasis | Â | Â |
| Â | Cooper transport | PPN025H09 | Putative copper-transporting ATPase 3 | AT1G63440 | HMA5 | Â | Â | Â | Â |
| Â | ion channel | PPN023C11 | Mechanosensitive ion channel | AT5G10490 | MSL2 | Â | Â | Â | Â |
| Â | Mg transport | PPN001H12 | MRS2-5 | AT2G03620 | MGT3 | Â | Â | Â | Â |
| Â | oligopepetide transport | PPN015D04 | Metal-nicotianamine transporter YSL6 | AT3G27020 | YSL6 | Â | Â | Â | Â |
| Â | Â | PPN028F10 | Oligopeptide transporter OPT superfamily | AT5G55930 | OPT1 | Â | Â | Â | Â |
| Â | Â | PPN035B10 | Oligopeptide transporter 7 | AT4G10770 | OPT7 | Â | Â | Â | Â |
| Â | Â | PPN057F10 | Oligopeptide transporter-like protein | AT3G54450 | Â | Â | Â | Â | Â |
k-means 11. Associated with high sensitivity to FB | |||||||||
Aminoacid metabolism | |||||||||
| Â | GABA biosynthesis | PPN044B12 | Glutamate decarboxylase, putative | AT3G17760 | GAD5 | Â | Â | Â | Â |
Pyruvate and Reactive carbonyl species | |||||||||
| Â | Conversion of oxalacetate to PEP | PP1002C02 | Phosphoenolpyruvate carboxykinase [ATP] | AT4G37870 | PEPCK;PCK1 | Â | Â | Â | Â |
| Â | Pyruvate conversion to acetyl-CoA | PPN054C12 | Pyruvate dehydrogenase | AT1G59900 | PDHE1-A | Â | Â | Â | Â |
| Â | Â | PPN059C05 | Pyruvate dehydrogenase E1 beta subunit isoform 3 | AT5G50850 | MAB1/PDHE1- | Â | Â | Â | Â |
| Â | Pyruvate-lactate interconversions | PP1006E06 | Aldehyde dehydrogenase putative | AT1G44170 | ALDH4/ALDH3H1 | ABA | Â | Â | Â |
| Â | Â | PPN035E06 | Aldehyde dehydrogenase | AT1G44170 | ALDH4/ALDH3H1 | ABA | Â | Â | Â |
| Â | Â | PPN038B05 | Aldehyde dehydrogenase, putative | AT1G44170 | ALDH4/ALDH3H1 | ABA | Â | Â | Â |