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Figure 2 | BMC Genomics

Figure 2

From: Hsf and Hsp gene families in Populus: genome-wide identification, organization and correlated expression during development and in stress responses

Figure 2

Phylogenetic relationships, gene structures and motif compositions of Hsp60 , Hsp70 and Hsp100 family members in A. thaliana (At) and P. trichocarpa (Pt). Multiple alignment of Hsp60 (A), Hsp70 (B) and Hsp100 (C) proteins from A. thaliana (At) and P. trichocarpa (Pt) was performed using MEGA 5.0 by the Neighbor-Joining (NJ) method with 1000 bootstrap replicates (left panel). Exon/intron structures of the Hsp60 (A), Hsp70 (B) and Hsp100 (C) genes are shown in the middle panel. Green boxes represent exons and black lines represent introns. The numbers indicate the splicing phases of the Hsp60 (A), Hsp70 (B) and Hsp100 (C) genes: 0, phase 0; 1, phase 1; and 2, phase 2. A schematic representation of conserved motifs (obtained using MEME) in Hsp60 (A), Hsp70 (B) and Hsp100 (C) proteins is displayed in the right panel. Different motifs are represented by different colored boxes. Details of the individual motifs are in the Additional file 6: Table S6, Additional file 7: Table S7 and Additional file 8: Table S8.

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BMC Genomics

ISSN: 1471-2164

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