Figure 3

Visualisation of a single insertion site in F. graminearum strain TP11.1. Sequence reads are visualised in a screenshot using Tablet software [16]. (A) Sequence reads mapped to this region of the genome, (B) coloured lines represent the genomic sequence of the visualised region and frame translations, (C) sequence coverage histogram, and (D) mapped reads for both flanking regions and the narrow gap between the two read stacks which marks the position of the plasmid insertion. Forward green stacks and reverse purple stacks are shown.