Table 6 The target genes for some salt-responsive known miRNAs
miRNA | Target gene No. | Description | Gene name |
|---|---|---|---|
miR156/157 | CL5609.Contig1 | ethylene-responsive transcription factor ERF113 | Rap2.6Â L |
| Â | CL967.Contig2 | glutamine synthetase | GS2 |
| Â | EX767226 | squamosa promoter-binding-like protein 13 | SPL13 |
| Â | FD556392 | squamosa promoter-binding-like protein 2 | SPL2 |
| Â | FD946000, FD946993, FD946993, FD560558, FD988312, EY898725, EX756914, EV551892, EV528056, Rsa#S43017568 | squamosa promoter-binding-like protein 3 | SPL3 |
| Â | FD557561, EX762240 | squamosa promoter-binding-like protein 5 | SPL5 |
| Â | EY930450 | squamosa promoter-binding-like protein 6 | SPL6 |
| Â | EX886942, EW715846,EX771535, EV548910 | squamosa promoter-binding-like protein 9 | SPL9 |
miR159 | EY949798, EY938664, Rsa#S42037487 | myb domain protein 101 | MYB101 |
| Â | EY896930 | myb domain protein 65 | MYB65 |
| Â | FD584389, EY935636, FD977876, Rsa#S42034459, Rsa#S42591074 | putative ubiquitin-conjugating enzyme E2 17 | UBC17 |
miR160 | FD576484, FD550653, EV524607, Rsa#S42581764 | auxin response factor 16 | ARF16 |
| Â | EX896877 | auxin response factor 17 | ARF17 |
miR164 | EX773809 | NAC domain containing protein 80 | NAC80 |
| Â | EW715661, EV566600 | NAC domain containing protein 100 | NAC100 |
miR165/166 | Unigene8382 | defensin-like protein 2 | LCR69 |
| Â | Unigene16151 | ATP synthase subunit G protein | Â |
miR169 | EV547500, EV543544 | glutamate decarboxylase 5 | GAD5 |
| Â | Unigene27845 | histone acetyltransferase HAC1 | HAC1 |
| Â | EX750227 | nuclear transcription factor Y subunit A-2 | NF-YA2 |
| Â | FD989248, EV526819 | nuclear transcription factor Y subunit A-3 | NF-YA3 |
miR172 | EX761783 | AP2-like ethylene-responsive transcription factor SNZ | SNZ |
| Â | EW732550 | AP2-like ethylene-responsive transcription factor TOE2 | TOE2 |
| Â | EY906836, FD572123 | Floral homeotic protein APETALA 2 | AP2 |
| Â | EY910663 | sulfate transporter 1.3 | SULTR1;3 |
miR395 | EX903518, FY437914, FY449298, FY448599, FY444096, FY449933, FY444103, EV539245 | ATP sulfurylase 1 | APS1 |
| Â | FY443904, FY441630, FY445587, FY444933,FY443821, FY442807, FY442799, EY933376, EY916371 | sulfate adenylyltransferase | APS4 |
miR396 | EW733962, EY907316 | transcription factor bHLH74 | Â |
| Â | EW733484, FY442946, FD941766, FD563793, EW713404, EW713403, FD971887, FD555982, FD551358, FD541643, EY908741, EX771641, EV550709, EV536225, EV535300, EV528362, EV524610 | atypical CYS HIS rich thioredoxin 5 | ACHT5 |
| Â | EY930318 | L-ascorbate peroxidase 1 | APX1 |
miR397 | FY438692 | laccase 2 | LAC2 |
| Â | FD987950, FY452752 | laccase 11 | LAC11 |
| Â | FD989705, EV528485 | laccase 17 | LAC17 |
| Â | Unigene4183 | Lectin-domain containing receptor kinase A4.3 | LECRKA4.3 |
miR398 | FD972015, FD549426, FD544311, EX773977, EX757683, EX749645, EV525782 | superoxide dismutase [Cu-Zn] | CSD1 |
miR399 | FD560927, EX890146 | putative ubiquitin-conjugating enzyme E2 24 | PHO2/UBC24 |
miR403 | EW726356, EX749374, Rsa#S41987411 | Argonaute family protein | AGO2 |
miR414 | Unigene3598 | ABC transporter G family member 10 | Â |
| Â | FD967208 | AP2-like ethylene-responsive transcription factor SNZ | SNZ |
| Â | CL5793.Contig1 | CBL-interacting serine/threonine-protein kinase 21 | CIPK21 |
| Â | Unigene10439 | pentatricopeptide repeat-containing protein | Â |
| Â | EV527283, EY913653 | potassium transporter | KUP3p |
| Â | EX886639 | scarecrow-like protein 13 | SCL13 |
miR482 | FD580320 | MATE efflux family protein | FRD3 |
miR841 | Unigene15520 | bZIP transcription factor family protein | Â |