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Table 1 Pacu de novo transcriptome metrics

From: Characterization of the transcriptome of fast and slow muscle myotomal fibres in the pacu (Piaractus mesopotamicus)

Parameters

Slow skeletal muscle

Fast skeletal muscle

Reads

704,550,985

765,658,497

Reads assembled

521,568,496

665,042,497

Contigs

504,065

Contig mean lenght (bp)

1,334

N50 (bp)

2,772

Contigs Annotated

232,637

Unique genes

15,000

Paralogues

406

Differentially expressed genes

3,473

2,458

Annotated Pathway

314

  1. N50: The value was computed by sorting all contigs from largest to smallest and by determining the minimum set of contigs whose sizes total 50% of the entire transcriptome.