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Table 3 Additive QTL identified with adult plant resistance to stem/yellow/leaf rust resistance in three RIL mapping populations based on consensus map

From: A high density GBS map of bread wheat and its application for dissecting complex disease resistance traits

Population

Trial

Chr

Pos.

Marker interval

Interval

LOD

Add

PVE (%)

QTL/Gene

PBW343 x MU

Sr-MS2011

1BL

111.5

4260657 - 1110373

1.97

2.61

-3.78

5.34

QSr.cim-1BL

PBW343 x MU

Sr-MS2010

1BL

112.5

4260657 - 1110373

1.97

3.27

-4.51

5.78

PBW343 x KS

Sr-MS2010

1BL

51.6

2289154 - 982224

1.05

3.89

7.37

15.9

Sr58/Yr29

PBW343 x KS

Sr-OS2010

1BL

48.3

7348297 - 999754

0.30

3.01

5.93

6.52

PBW343 x KS

Yr-T2010

1BL

48.3

7348297 - 999754

0.30

2.62

8.14

9.35

PBW343 x KS

Lr-OB2010

2AL

12.5

4409864 - 1123745

3.04

2.62

-7.37

3.96

QLr.cim-2AL

PBW343 x MU

Sr-MS2010

2BS

4.25

4989818 - 1088282

4.73

3.59

-4.83

6.68

QSr.cim-2BS1

PBW343 x KB

Sr-MS2010

2BS

120.6

2256042 - 988615

1.56

2.63

-3.51

4.06

QSr.cim-2BS2

PBW343 x KS

Sr-MS2009

2BL

165.5

2277655 - 1772231

0.22

2.62

-4.84

9.08

QSr.cim-2BL

PBW343 x MU

Sr-MS2009

2DS

28.5

989323 - 1242814

2.19

3.4

5.36

10.31

QSr.cim-2DS

PBW343 x KS

Sr-MS2010

3AL

229.0

3941600 - 1252939

2.46

3.12

-6.63

13.16

QSr.cim-3AL

PBW343 x KB

Sr-MS2009

3BS

19.5

1057406 - 1280418

6.87

13.1

-7.94

24.45

Sr2

PBW343 x KB

Sr-MS2010

3BS

19.5

1057406 - 1280418

6.87

17.1

-10.12

33.95

PBW343 x KB

Sr-OS2010

3BS

19.5

1057406 - 1280418

6.87

16.3

-10.39

33.39

PBW343 x KS

Sr-OS2010

3BS

29.05

1106039 - 1314625

13.40

4.95

-8.38

13.3

PBW343 x MU

Sr-OS2010

3BS

28.89

1106039 - 1140316

4.21

15.7

-10.63

37.79

PBW343 x MU

Sr-MS2009

3BS

25.8

1280418 - 1035021

1.05

2.84

-4.93

8.72

PBW343 x MU

Sr-MS2011

3BS

20.3

1321267 - 1280418

6.87

9.3

-7.88

23.24

PBW343 x KS

Sr-MS2009

3BS

96.6

2296999 - 3022044

1.40

2.79

-4.87

9.66

QSr.cim-3BS1

PBW343 x KB

Sr-MS2010

3BS

170.3

1258147 - 993237

1.71

2.69

-3.66

4.42

QSr.cim-3BS2

PBW343 x KS

Sr-MS2010

3BS

144.0

3222133 - 4991367

2.82

2.77

-6.49

12.62

PBW343 x KS

Sr-OS2010

3DS

14.0

2327992 - 1148522

0.98

3.23

6.05

6.89

QSr.cim-3DS

PBW343 x KB

Sr-OS2010

4AS

4.0

1092224 - 3945735

3.40

2.81

4.12

5.18

QSr.cim-4AS

PBW3433 x KB

Sr-OS2010

5BL

148.0

4410058 - 1161136

1.72

3.85

5.48

9.28

QSr.cim-5BL

PBW343 x MU

Sr-OS2010

5BL

156.0

1298718 - 1025982

0.57

3.88

5.14

7.88

PBW343 x MU

Sr-MS2011

5BL

156.0

1298718 - 1025982

0.57

2.54

4.35

6.3

PBW343 x KS

Sr-OS2010

6BL

93.1

984306 - 3025087

2.82

2.69

-4.87

5.89

QSr/Yr.cim-6BL

PBW343 x KS

Yr-T2010

6BL

95.0

984306 - 3025087

2.82

2.54

-3.66

8.99

PBW343 x KS

Sr-MS2010

6DL

0.74

1096393 - 1128614

11.69

4.5

-8.53

21.73

QSr.cim-6DL

PBW343 x KS

Sr-OS2010

6DL

0.74

1096393 - 1128614

11.69

2.59

-5.49

5.69

PBW343 x KS

Sr-OS2010

7AS

3.50

4989858 - 989662

4.00

3.91

-6.74

8.52

QSr.cim-7AS

PBW343 x MU

Sr-MS2010

7AS

2.36

1240640 - 4990306

2.86

3.6

-4.99

7.13

PBW343 x KS

Lr-OB2010

7DS

61.0

1128052 - 4991056

3.16

9.53

-17.21

19.5

Lr34

  1. KS: Kenya Swara.
  2. KB: Kingbird.
  3. MU: Muu.
  4. Marker intervals: Numbers correspond to the GBS based SNP tags.
  5. Pos.: Position of QTLs on chromosomes in centi-Morgan.
  6. Intervals: Centi-morgan distance between two markers of the interval.
  7. MS: Main season; OS: Off season; Sr: Sem rust; Yr: Yellow rust; Lr: leaf rust.