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Table 3 KEGG pathways of DEGs in different comparisons

From: Global gene expression patterns of grass carp following compensatory growth

KEGG term

E-1-M/C-1-M

E-1-L/C-1-L

E-2-M/C-2-M

E-2-L/C-2-L

E-2-M/E-1-M

E-2-L/E-1-L

Metabolic pathways

331

242

  

372

284

Carbon metabolism

51

30

10

8

50

36

Fatty acid metabolism

26

17

  

26

18

Glycine, serine and threonine metabolism

24

17

5

 

30

20

Citrate cycle (TCA cycle)

22

11

48

 

18

 

Biosynthesis of amino acids

37

22

9

 

43

24

Glyoxylate and dicarboxylate metabolism

15

   

16

11

Glycolysis/Gluconeogenesis

26

18

    

Biosynthesis of unsaturated fatty acids

11

9

   

9

Steroid biosynthesis

10

13

  

13

 

Terpenoid backbone biosynthesis

11

11

4

  

12

Selenocompound metabolism

8

9

  

9

8

2-Oxocarboxylic acid metabolism

10

   

13

 

Fructose and mannose metabolism

18

     

Cysteine and methionine metabolism

16

13

6

 

23

 

Amino sugar and nucleotide sugar metabolism

 

21

   

21

N-Glycan biosynthesis

 

17

   

17

Glycerophospholipid metabolism

 

23

   

26

Arginine and proline metabolism

 

18

  

30

21

Starch and sucrose metabolism

 

13

   

14

Pyruvate metabolism

 

13

  

22

14

Pentose phosphate pathway

 

10

    

One carbon pool by folate

9

7

  

11

7

Porphyrin and chlorophyll metabolism

  

7

  

12

Pyrimidine metabolism

  

9

 

47

 

Propanoate metabolism

    

19

 

Phenylalanine metabolism

     

7

Ubiquinone and other terpenoid-quinone biosynthesis

     

5

Valine, leucine and isoleucine degradation

    

22

 

Protein processing in endoplasmic reticulum

53

41

  

67

56

DNA replication

20

 

6

 

31

13

Proteasome

22

19

   

22

Aminoacyl-tRNA biosynthesis

 

20

7

7

 

22

Ribosome biogenesis in eukaryotes

  

12

7

36

 

RNA transport

    

68

 

Mismatch repair

    

16

 

Spliceosome

    

55

 

Protein export

    

14

 

Nucleotide excision repair

    

23

 

Homologous recombination

    

15

 

Base excision repair

    

16

 

ECM-receptor interaction

33

   

36

 

Cell cycle

47

   

58

33

Peroxisome

     

23