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Table 3 Compositional and statistical summary of SEATS metagenomes

From: Prokaryotic assemblages and metagenomes in pelagic zones of the South China Sea

Characteristics 10 m 100 m 1000 m 3000 m
Total reads 228154 270377 248730 222911
Total read length (bp) 52534435 63904461 58780946 51977555
Average read length (bp) 230 236 236 233
Total contigs 15914 24881 21425 23057
Total contig length (bp) 3590518 5694438 6496827 5425432
Total reads on contig 47099 77074 144516 81612
Average coverage per contig 3.02x 3.19x 5.25x 3.50x
% G + C of contigs 37.6 39.7 46.3 47.0
Total ORFs 14346 22888 21362 20006
% eggNOG hits (e ≤10−5) 64.5 58.9 60.1 62.0
% eggNOG hits (e ≤10−5, bits ≥100) 29.4 22.1 30.1 26.4
Average genome size ± sd (Mbp) 1.72 ± 0.01 1.84 ± 0.03 3.95 ± 0.03 3.42 ± 0.03