Figure 3

SNPs and small indels between the three Chinese wild Vitis , BH, HN and S, and PN40024. (A) Number of SNPs at different annotated regions of the reference PN40024 genome. (B) Number of small indels at different annotated regions of the reference PN40024 genome. (C) Number of genes affected by SNPs and small indels. SSA/D, splice site acceptor or splice site donor; FS, frame shift; SpG, stop codon gained; SpL, stop codon lost; StL, start codon lost. BH, V. pseudoreticulata accession “Baihe-13-1”; HN, V. pseudoreticulata accession “Hunan-1”; S, V. quinquangularis accession “Shang-24”.