Table 2 AgriGO parametric analysis of gene set enrichment (PAGE) analysis (blastocyst versus morula)
GO_acc | Ontology | Description | Genes # | p-value | FDR |
|---|---|---|---|---|---|
GO:0006629 | P | lipid metabolic process | 311 | 0 | 0 |
GO:0016070 | P | RNA metabolic process | 840 | 2.70E-29 | 2.70E-26 |
GO:0006396 | P | RNA processing | 242 | 1.00E-28 | 7.00E-26 |
GO:0010467 | P | gene expression | 1068 | 6.50E-22 | 3.20E-19 |
GO:0006139 | P | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 1169 | 4.20E-20 | 1.70E-17 |
GO:0003676 | F | nucleic acid binding | 929 | 5.70E-35 | 2.40E-32 |
GO:0003723 | F | RNA binding | 252 | 1.00E-20 | 2.20E-18 |
GO:0003677 | F | DNA binding | 623 | 7.00E-19 | 1.00E-16 |
GO:0030528 | F | transcription regulator activity | 445 | 4.40E-11 | 4.70E-09 |
GO:0004194 | F | pepsin A activity | 14 | 1.40E-10 | 1.20E-08 |
GO:0016020 | C | membrane | 1629 | 0 | 0 |
GO:0005886 | C | plasma membrane | 907 | 0 | 0 |
GO:0044425 | C | membrane part | 1280 | 0 | 0 |
GO:0044421 | C | extracellular region part | 564 | 0 | 0 |
GO:0016021 | C | integral to membrane | 1012 | 0 | 0 |