Table 3 List of the most differentially expressed genes between inner cell mass and trophectoderm

1

NANOG

Homeobox protein NANOG

ENSBTAP00000027863

13.2

2

UPP1

uridine phosphorylase 1

ENSBTAP00000011088

8.9

3

SOX2

SRY (sex determining region Y)-box 2

ENSBTAP00000015411

8.6

4

CAV1

Caveolin-1

ENSBTAP00000023751

7.8

5

AK3L1

Adenylate kinase isoenzyme 4, mitochondrial

Q0VCP1

7.5

6

LOC616039

pancreatic trypsin inhibitor-like

XP_873093

7.4

7

OTX2

agilent:“Bos taurus orthodenticle homeobox 2 (OTX2), mRNA

ENSBTAP00000019616

7.2

8

GPC4

agilent:“Bos taurus glypican 4 (GPC4), mRNA

ENSBTAP00000027510

7.1

9

HAS2

hyaluronan synthase 2

ENSBTAP00000026503

7.1

10

SLC4A7

solute carrier family 4, sodium bicarbonate cotransporter, member 7

AAI42306.1

7.1

11

HNF4A

agilent:“Bos taurus hepatocyte nuclear factor 4, alpha (HNF4A), mRNA

ENSBTAP00000016078

7.0

12

CLIC6

CLIC6 chloride intracellular channel 6

ENSBTAP00000002299

6.9

13

LGALS4

galectin-4

ENSBTAP00000021701

6.8

14

ID1

DNA-binding protein inhibitor ID-1

ENSBTAP00000021521

6.7

15

FLRT3

fibronectin leucine rich transmembrane protein 3

ENSBTAP00000004298

6.6

16

PDGFRA

agilent:“Bos taurus platelet-derived growth factor receptor, alpha polypeptide (PDGFRA), mRNA

ENSBTAP00000009441

6.6

17

NID1

nidogen 1

ENSBTAP00000009531

6.5

18

KIT

Mast/stem cell growth factor receptor

ENSBTAP00000003498

6.5

19

GRP

agilent:“Bos taurus gastrin-releasing peptide GRP mRNA, complete cds.

ENSBTAP00000006297

6.5

20

LOC100139916

LOC100139916 interleukin 32-like

6.5

21

TKTL1

Transketolase-like protein 1

ENSBTAP00000036249

6.4

22

A2M

Alpha-2-macroglobulin

ENSBTAP00000006167

6.4

23

PDYN

proenkephalin-B preproprotein

AAI51344.1

6.1

24

ACTG2

actin, gamma 2, smooth muscle, enteric

ENSBTAP00000036954

6.0

25

MME

membrane metallo-endopeptidase

ENSBTAP00000002681

6.0