Table 2 Microbial genomes deposited with IMG as of January 2014 with more than one copy of genes encoding proteins similar to LodA/GoxA
Genome Name | Phylum | Class | Phylogenetic Group of LodA-like proteins | ||
|---|---|---|---|---|---|
Tenacibaculum ovolyticum DSM 18103 | Bacteroidetes | Flavobacteria | II | IIIA | |
Kordia algicida OT-1 | Bacteroidetes | Flavobacteria | II | IVB | |
Thalassobaculum salexigens DSM 19539 | Proteobacteria | Alphaproteobacteria | IIB | IIB | |
Bradyrhizobium japonicum USDA 38 and USDA 6 | Proteobacteria | Alphaproteobacteria | ID | IVA | |
Nitrobacter hamburgensis X14 | Proteobacteria | Alphaproteobacteria | ID | None | |
Xanthobacter sp. 126 | Proteobacteria | Alphaproteobacteria | IB | None | |
Citreicella sp. SE45 | Proteobacteria | Alphaproteobacteria | IB | IIIB | |
Burkholderia sp. BT03 | Proteobacteria | Betaproteobacteria | III | None | |
Chitinimonas koreensis DSM 17726 | Proteobacteria | Betaproteobacteria | ID | III | |
Cellvibrio japonicus Ueda107 | Proteobacteria | Gammaproteobacteria | IB | III | |
Marinomonas mediterranea MMB-1 | Proteobacteria | Gammaproteobacteria | IA | IIB | III |
Oceanospirillum beijerinckii DSM 7166 | Proteobacteria | Gammaproteobacteria | IB | III | |
Pseudoalteromonas citrea NCIMB 1889 | Proteobacteria | Gammaproteobacteria | IA | II | IIIA |
Pseudoalteromonas luteoviolacea 2ta16 | Proteobacteria | Gammaproteobacteria | IA | IB | |
Pseudoalteromonas rubra ATCC 29570 | Proteobacteria | Gammaproteobacteria | IB | IIIA | |
Pseudoalteromonas flavipulchra 2ta6, JG1 | Proteobacteria | Gammaproteobacteria | IA | IIIA | |
Pseudoalteromonas piscicida ATCC 15057 and JCM 20779 | Proteobacteria | Gammaproteobacteria | IA | IIIA | |
Rheinheimera sp. A13L | Proteobacteria | Gammaproteobacteria | IA | IIIA | |
Gymnopus luxurians FD-317 M1 | Basidiomycota | Agaricomycetes | V | V | |