From: X-inactivation informs variance-based testing for X-linked association of a quantitative trait
Simulation parameters | X-inactivation and 10% additional noise in heterozygous females | X-inactivation and 20% additional noise in heterozygous females | ||||||
---|---|---|---|---|---|---|---|---|
Standard | Variance | Shared (expected) | Standard | Variance | Shared (expected) | |||
N = 1000 | MAF = 0.1 | a = 0.1 | 26.5 | 17.8 | 4.5 (4.7) | 26.9 | 40.6 | 10.6 (10.9) |
N = 1000 | MAF = 0.3 | a = 0.1 | 51.0 | 29.2 | 15.1 (14.9) | 49.9 | 62.5 | 30.8 (31.2) |
N = 1000 | MAF = 0.1 | a = 0.2 | 73.8 | 24.0 | 18.0 (17.7) | 73.6 | 47.5 | 34.6 (34.9) |
N = 1000 | MAF = 0.3 | a = 0.2 | 98.1 | 39.2 | 37.7 (38.5) | 97.8 | 71.2 | 63.6 (69.6) |
N = 2000 | MAF = 0.1 | a = 0.1 | 46.7 | 29.6 | 14.2 (13.8) | 45.9 | 65.9 | 29.8 (30.2) |
N = 2000 | MAF = 0.3 | a = 0.1 | 81.1 | 45.2 | 36.9 (36.7) | 80.8 | 87.2 | 70.5 (70.5) |
N = 2000 | MAF = 0.1 | a = 0.2 | 95.7 | 41.4 | 39.7 (39.6) | 95.2 | 75.8 | 72.2 (72.2) |
N = 3000 | MAF = 0.1 | a = 0.1 | 62.3 | 39.4 | 25.4 (24.5) | 62.5 | 82.2 | 51.5 (51.4) |
N = 3000 | MAF = 0.3 | a = 0.1 | 93.1 | 57.9 | 54.1 (53.9) | 93.1 | 96.0 | 89.3 (89.4) |
N = 3000 | MAF = 0.1 | a = 0.2 | 99.3 | 54.8 | 53.6 (54.4) | 99.2 | 89.7 | 88.9 (89.0) |
N = 5000 | MAF = 0.1 | a = 0.1 | 83.5 | 57.0 | 47.6 (47.6) | 82.3 | 95.7 | 78.7 (78.7) |