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Table 1 Collection number, origin, bioproject and accession number of the 21 newly sequenced strains

From: Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii

Number in CIRM-BIA collection (Rennes, France)

Number in actalia collection (Rennes, France)

Locus_tag

Isolated from (date)

Bioproject

Raw reads accession number

9

 

PFCIRM9

Emmental cheese (1989)

PRJEB6427

ERS638416

118

 

PFCIRM118

Gruyère cheese (1973)

PRJEB6428

ERS638410

119

 

PFCIRM119

Gruyère cheese (1973)

PRJEB6430

ERS638409

121

 

PFCIRM121

Swiss cheese (1937)

PRJEB6431

ERS638414

122

 

PFCIRM122

NCIB (1992)

PRJEB6432

ERS638421

123

 

PFCIRM123

Morbier cheese (1992)

PRJEB6438

ERS638423

125

ITG P14

PFCIRM125

Emmental cheese (1992)

PRJEB6434

ERS638418

127

ITG P18

PFCIRM127

Emmental cheese (1992)

PRJEB6435

ERS638428

129

ITG P20

PFCIRM129

Emmental cheese (1992)

PRJEB4826

ERS638425

134

 

PFCIRM134

NA

PRJEB6441

ERS638419

135

 

PFCIRM135

ewe raw milk (1994)

PRJEB6442

ERS638422

138

ITG P9

PFCIRM138

Emmental cheese (1992)

PRJEB6433

ERS638424

139

ITG P23

PFCIRM139

Emmental cheese (1992)

PRJEB6436

ERS638426

456

 

PFCIRM456

raw milk Raclette cheese (1992)

PRJEB6445

ERS638427

508

 

PFCIRM508

Gruyère (1973)

PRJEB6429

ERS638411

512

 

PFCIRM512

raw milk Morbier cheese (1994)

PRJEB6439

ERS638413

513

 

PFCIRM513

egyptian ras cheese (1995)

PRJEB6440

ERS638415

514

 

PFCIRM514

hay (1994)

PRJEB6443

ERS638417

516

 

PFCIRM516

nepalian yack cheese (2000)

PRJEB6444

ERS638420

527

 

PFCIRM527

Fribourg cheese (1992)

PRJEB6437

ERS638412

1025

ITG P1

PFCIRM1025

Emmental cheese (1992)

PRJEB6446

ERR738371

  1. All sequences and annotations are now publicly available. They were deposited in the EMBL database and can now be retrieved using the Bioproject accession.