Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii

Table 2 Assembly and annotation metrics of 21 newly sequenced strains

CIRM-BIA strain names	Actalia strain names	Read quantity	Read length	Sequencing depth	Number of scaffolds >1000 bp	Cumulative contig length	N50	Number of N segments	Number of complete genes
9		26 013 151	37	370	204	2 533 825	21 887	0	2 308
118		51 926 392	37	739	41	2 583 496	193 767	59	2 325
119		58 084 132	37	827	46	2 644 402	128 788	91	2 422
121		52 432 380	37	746	59	2 561 530	86 244	68	2 304
122		54 950 090	37	782	78	2 614 705	73 741	70	2 348
123		54 523 668	37	776	47	2 604 827	114 519	78	2 377
125	ITG P14	54 868 488	37	781	43	2 511 448	238 430	59	2 272
127	ITG P18	55 178 920	37	785	57	2 567 344	81 280	53	2 330
129	ITG P20	52 269 870	37	744	59	2 591 314	123 180	59	2 338
134		50 523 582	37	719	47	2 635 396	153 798	152	2 318
135		50 649 408	37	721	47	2 620 043	114 923	75	2 343
138	ITG P9	58 100 372	37	827	72	2 573 580	80 515	110	2 304
139	ITG P23	60 700 312	37	864	45	2 589 117	106 963	53	2 362
456		49 094 398	37	699	38	2 502 068	131 281	61	2 253
508		50 259 834	37	715	47	2 578 004	141 315	93	2 302
512		63 808 750	37	908	45	2 580 419	153 592	57	2 349
513		62 230 134	37	886	48	2 659 761	179 407	54	2 416
514		51 481 488	37	733	51	2 521 626	121 592	66	2 285
516		61 823 266	37	880	62	2 630 828	125 877	205	2 342
527		69 806 362	37	993	63	2 576 369	104 864	57	2 344
1025	ITG P1	61 323 626	81	1 910	104	2 699 685	62 523	19	2 308

ISSN: 1471-2164