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Table 3 Discovery of unigenes involved in triterpene saponin biosynthesis in P. notoginseng

From: Transcriptome analysis of leaves, roots and flowers of Panax notoginseng identifies genes involved in ginsenoside and alkaloid biosynthesis

Enzymes name EC number Abbreviation Leaves Roots Flowers
Acetyl-CoA acetyltransferase 2.3.1.9 AACT 587.76 1142.49 816.36
Hydroxymethyl glutaryl CoA synthase 2.3.3.10 HMGS 110.12 634.67 200.10
3-hydroxy-3-methylglutaryl-coenzymeA reductase 1.1.1.34 HMGR 117.75 961.07 263.98
Mevalonate kinase 2.7.1.36 MK 9.42 261.79 19.36
Phosphomevalonate kinase 2.7.4.2 PMK 211.09 107.73 251.65
Mevalonate diphosphosphate decarboxylase 4.1.1.33 MDD 27.24 252.63 46.67
Isopentenylpyrophosphate isomerase 5.3.3.2 IPI 81.66 115.06 112.65
Geranylgeranyl pyrophosphate synthase 2.5.1.29 GGPS 63.48 106.71 136.29
Geranylgeranyl diphosphate synthase 2.5.1.1 GGR 178.22 1283.19 586.18
Farnesyl diphosphate synthase 2.5.1.10 FPS 18.93 252.86 54.37
Squalene synthase 2.5.1.21 SS 57.08 435.07 63.94
Squalene epoxidase 1.14.13.132 SE 53.97 1690.83 118.00
β-amyrin synthase 5.4.99.39 AS 6.47 12.30 8.34
Dammarenediol-II synthase 4.2.1.125 DS 162.68 1526.21 124.10
  1. The values in different organs indicate the reads per kilobase of transcript per million reads mapped (RPKM).