From: Assessing structural variation in a personal genome—towards a human reference diploid genome
Program | Total called | Supported | Unsupported | FDR | Sensitivity |
---|---|---|---|---|---|
CNVnator | 6,197 | 1,211 | 4,986 | 80.46% | 22.62% |
BreakDancer | 5,520 | 2,269 | 3,251 | 58.89% | 42.39% |
Delly | 3,720 | 1,669 | 2,051 | 55.13% | 31.18% |
Crest | 2,219 | 1,889 | 330 | 14.87% | 35.29% |
Pindel | 4,451 | 3,035 | 1,416 | 31.81% | 56.70% |
SV-STAT | 892 | 876 | 16 | 1.79% | 16.36% |
Tiresias | 1,347 | 417 | 930 | 69.04% | 7.79% |
Spiral | 1,881 | 1,824 | 57 | 3.03% | 34.07% |
Parliament | 3,082 | 2,852 | 258 | 8.37% | 57.34% |