Figure 3
From: Codon usage and codon context bias in Xanthophyllomyces dendrorhous
Codon usage of the X. dendrorhous totivirus genomes. L1A-CP and L1B-CP correspond to the ORFs of the capsid protein, and L1A-Pol and L1B-Pol are the ORFs of the polymerases from XdV-L1A and XdV-L1B, respectively. A: Codon usage of the totiviral ORFs. The continuous color scale indicates the most common, intermediate and less frequent codons in red, green and black, respectively. B: Graphical representation of the RSCU ratios from each totiviral ORF and from each expression level group in the HV- and ribosomal- (R) groupings. Ratios between 0.9 and 1.1 are represented in blue, indicating similarity, whereas ratios outside this range are represented in black.