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Table 1 Sequencing statistics and general characteristics of C. resedifolia and C. impatiens plastome assembly

From: Plastome organization and evolution of chloroplast genes in Cardamine species adapted to contrasting habitats

  C. resedifolia C. impatiens
PE reads with a Q > 30 650335 (315 bp*) 847076 (325 bp*)
Type of Assembler de-bruijn Graph de-bruijn Graph
K-mer used 63 63
Number of scaffolds 36 48
Reference species Nasturtium officinale Nasturtium officinale
Assembled plastome size 155036 bp 155611 bp
Number of genes 85(79unique) 85(79unique)
Number of t-RNA 37(30unique) 37(30unique)
Number of r-RNA 8(4unique) 8(4unique)
Length of IRa and IRb 26502 bp 26476 bp
Length of SSC 17867 bp 17948 bp
Length of LSC 84165 bp 84711 bp
Annotation cpGAVAS, DOGMA CpGAVAS, DOGMA
  1. *Number in parenthesis indicate the insert size of the PE library.