Table 3 Positive selection sites identified with selecton with d.f. =1
Gene | Null | Positive | Putative sites under positive selection * |
|---|---|---|---|
ycf1 | -21668,5 | -21647,6 | 24(343 P, 424 A, 533 D, 565 H, 970 L, 1293 L, 1313 N, 1399 R, 1400 N, 1414 R, 459 W, 564 I, 738 K, 922 F, 928 L, 1081 F, 1113 T, 1235 K, 1259 P, 1343 R, 1428 F, 1475 S, 1477 R, 1533 Y) |
rbcL | -3000,07 | -2984,64 | 3(326 V, 472 V, 477 A) |
rpoC2 | -11431,8 | -11423,5 | 7(490 F, 527 L, 540 P, 541 H, 981 A, 998 L, 1375 Y) |
rpl14 | -631,147 | -623,836 | 2(18 K, 33 K) |
matK | -5014,38 | -5007,21 | 1(51 V) |
petD | -1052,21 | -1045,47 | 2(138 V, 139 V) |
ndhF | -6497,59 | -6491,61 | 4(65 I, 509 F, 594 Q, 734 M) |
ccsA | -3031,79 | -3026,12 | 5(97 H, 100 H, 176 L, 182 E, 184 F) |
accD | -4142,84 | -4137,43 | 3(112 F, 167 H, 485 E) |
rpl20 | -834,791 | -831,556 | 2(80 R, 117 E) |