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Table 1 Summary of sequence counts from small RNA libraries. Samples were obtained from different developmental stages and four tissues (brain, gonad, liver, and pituitary) of Atlantic cod

From: Temperature during early development has long-term effects on microRNA expression in Atlantic cod

Description Development count Tissues count
Raw SOLiD reads 303 165 498 268 844 467
Adapter only sequences 676 039 605 210
Reads without 3’ adapter sequence 42 928 670 67 064 659
Low quality sequences 24 440 083 27 931 725
Size ≤ 15 nt 10 286 414 4 750 802
Artifact sequences 83 923 60 426
High quality, filtered sequences 224 750 369 168 431 645
Unique sequences 23 084 734 24 341 799
miRBase v20 alignment
No mismatches 49 845 256 67 205 304
1 mismatches 9 025 096 11 872 566
Types of conserved mature miRNAs 281 281