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Table 2 Over-represented biological pathways found within the specifically transcribed gene subset detected in embryogenic tissues

From: Global scale transcriptome analysis of Arabidopsis embryogenesis in vitro

Plant biological pathway Probability
Glucosinolate biosynthesis from tryptophan 2.50E-03
Glucosinolate biosynthesis from phenylalanine 2.70E-03
Glucosinolate biosynthesis from homomethionine 2.70E-03
Anthocyanin biosynthesis 2.90E-03
Gibberellin biosynthesis III (early C-13 hydroxylation) 3.30E-03
Cytokinins-O-glucoside biosynthesis 4.10E-03
Cytokinins 7-N-glucoside biosynthesis 4.10E-03
Cytokinins 9-N-glucoside biosynthesis 4.10E-03
ent-kaurene biosynthesis 4.30E-03
(deoxy)ribose phosphate degradation 1.40E-02
Abscisic acid biosynthesis 1.80E-02
de novo biosynthesis of purine nucleotides II 1.90E-02
Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) 2.10E-02
Gibberellin biosynthesis II (early C-3 hydroxylation) 2.10E-02
Gibberellin inactivation 2.10E-02
de novo biosynthesis of purine nucleotides I 7.60E-02
Trans-zeatin biosynthesis 9.50E-02