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Table 2 Over-represented biological pathways found within the specifically transcribed gene subset detected in embryogenic tissues

From: Global scale transcriptome analysis of Arabidopsis embryogenesis in vitro

Plant biological pathway

Probability

Glucosinolate biosynthesis from tryptophan

2.50E-03

Glucosinolate biosynthesis from phenylalanine

2.70E-03

Glucosinolate biosynthesis from homomethionine

2.70E-03

Anthocyanin biosynthesis

2.90E-03

Gibberellin biosynthesis III (early C-13 hydroxylation)

3.30E-03

Cytokinins-O-glucoside biosynthesis

4.10E-03

Cytokinins 7-N-glucoside biosynthesis

4.10E-03

Cytokinins 9-N-glucoside biosynthesis

4.10E-03

ent-kaurene biosynthesis

4.30E-03

(deoxy)ribose phosphate degradation

1.40E-02

Abscisic acid biosynthesis

1.80E-02

de novo biosynthesis of purine nucleotides II

1.90E-02

Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation)

2.10E-02

Gibberellin biosynthesis II (early C-3 hydroxylation)

2.10E-02

Gibberellin inactivation

2.10E-02

de novo biosynthesis of purine nucleotides I

7.60E-02

Trans-zeatin biosynthesis

9.50E-02