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Table 1 Genes defined as sexually dimorphic from eight-cell embryos

From: Sexually dimorphic gene expression emerges with embryonic genome activation and is dynamic throughout development

Gene name

CHR

Start

End

Strand

baseMean

log2FoldChange

Xist

chrX

103460373

103483233

-

275.66

−9.01

Ube1y1

chrY

818713

844224

+

232.95

9.02

Ddx3y

chrY

1260715

1286613

-

153.51

8.49

Bex1

chrX

136213972

136215513

-

168.51

−6.46

B230206F22Rik

chrX

103560910

103623754

-

34.38

−6.73

Sms

chrX

157443954

157492046

-

6792.54

−1.32

Eif2s3y

chrY

1010612

1028598

+

224.03

5.94

Rbm3

chrX

8138975

8145802

-

3756.52

−1.06

Fthl17

chrX

9033486

9034333

+

18.80

−5.67

Huwe1

chrX

151803282

151935417

+

2245.04

−0.81

Hprt

chrX

52988078

53021660

+

16923.45

−1.10

Eif2s3x

chrX

94188709

94212651

-

3306.76

−0.81

Syap1

chrX

162856843

162888462

-

2009.79

−1.13

Yy2

chrX

157566119

157568985

-

237.80

−2.07

Eif1ax

chrX

159372195

159385699

+

1826.30

−1.01

Ccng1

chr11

40748552

40755286

-

403.37

1.88

D7Ertd715e

chr7

59969577

59974431

-

365.59

−1.63

Atp6ap2

chrX

12587759

12617051

+

1103.98

−1.02

Uba1

chrX

20658421

20683179

+

4718.65

−0.82

Ddx3x

chrX

13281022

13293983

+

4503.61

−0.96

Timm8a1

chrX

134537258

134541629

-

3804.40

−1.20

Tsr2

chrX

151087094

151096543

-

2495.42

−0.76

Med14

chrX

12675371

12761973

-

725.57

−1.36

Usp38

chr8

80980733

81014906

-

1115.47

−0.99

Rhox5

chrX

37754608

37808878

+

27.14

−3.92

Gnl3l

chrX

150983133

151017322

-

910.96

−0.74

Kdm6a

chrX

18162667

18279358

+

481.77

−0.98

Als2cr11

chr1

59050506

59094900

-

9.24

4.02

Aen

chr7

78895927

78908833

+

513.62

0.99

Bcap31

chrX

73686183

73716175

-

1554.31

−0.63

Rbbp7

chrX

162760372

162779090

+

4036.08

−0.81

Acsl4

chrX

142317993

142390535

-

1262.01

−1.08

Idh3g

chrX

73778963

73786897

-

2177.00

−0.71

Lamp2

chrX

38405064

38456455

-

1278.91

−1.03

Rbmx

chrX

57383348

57393036

-

321.01

−0.91

Porcn

chrX

8193850

8206525

-

303.00

−1.11

Ssr4

chrX

73787028

73790828

+

798.15

−0.82

Otud5

chrX

7841831

7874858

+

728.02

−0.71

1810030O07Rik

chrX

12654884

12673546

-

134.89

−1.85

Atrx

chrX

105797615

105929372

-

707.08

−0.85

Prps1

chrX

140456603

140476140

+

8178.23

−0.77

Aifm1

chrX

48474944

48513426

-

387.98

−1.18

Gm14511

chrX

8975712

8976559

-

31.79

−3.30

Mapkapk2

chr1

131053704

131097543

-

46.62

2.72

Wdr45

chrX

7722249

7728201

+

2311.35

−0.85

Cox7b

chrX

106015700

106022450

+

116.54

−1.37

Mad2l1bp

chr17

46147385

46153551

-

1191.38

−0.92

Tmem56

chr3

121202010

121263316

-

542.41

−1.12

Rpl10

chrX

74270816

74273135

+

14774.94

−0.80

Cybasc3

chr19

10577723

10589830

+

465.93

0.85

Mtf1

chr4

124802549

124849800

+

512.08

−0.75

Cks2

chr13

51645232

51650662

+

2503.02

−0.66

Gm14458

chrX

8985900

8986755

-

5.13

−3.53

Cdca7

chr2

72476219

72486890

+

867.49

0.67

Pgrmc1

chrX

36598225

36606079

+

414.68

−1.00

Thoc2

chrX

41794994

41911901

-

381.21

−1.06

Cited1

chrX

102247440

102251769

-

3344.44

−0.53

Ypel5

chr17

72836704

72851195

+

2403.16

−0.70

Cdk16

chrX

20688493

20699877

+

802.78

−0.70

Dnajc28

chr16

91614257

91618999

-

10.24

3.47

Fmr1

chrX

68678555

68717961

+

587.22

−1.20

Gla

chrX

134588169

134601005

-

476.84

−1.06

Hnrnph2

chrX

134601286

134607054

+

879.15

−0.74

Mpp1

chrX

75109733

75130949

-

430.95

−1.07

Msl3

chrX

168654118

168673902

-

355.99

−1.12

Tbc1d25

chrX

8154472

8176181

-

258.99

−1.15

Trappc1

chr11

69323986

69325793

+

118.07

1.26

Utp14a

chrX

48256934

48282449

+

619.81

−0.73

Xiap

chrX

42067836

42109664

+

449.57

−0.86

  1. Dimorphic genes were defined from RNA-seq data generated from 6 male and 6 female eight-cell embryos (adjusted p-value < 0.1, (Benjamini-Hochberg correction) and −0.5 < log2(male/female) > 0.5). TSS = transcriptional start site.