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Table 3 Coverage of two Illumina-sequenced Cryptosporidium hominis genomes in sequence gaps of the published C. parvum IOWA genome

From: Comparative genomic analysis reveals occurrence of genetic recombination in virulent Cryptosporidium hominis subtypes and telomeric gene duplications in Cryptosporidium parvum

Chromosome Gap in C. parvum IOWA (bp) Sequence length in C. hominis specimen (bp)
37999 30976
2 100* 1481 1481
3 500 5582 5576
4 100 (1st)* >458 1450
4 100 (2nd)* 2937 2714
5 100 (1st)* 14,926 14,929
5 100 (2nd)* 1788 1311
5 1,000 (3rd) Not covered 467
6 2,500 245 245
6 100* >538 (ending with telomeric repeats) >857 (ending with telomeric repeats)
8 10,000 19,048 bp deletion spanning entire gap 19,048 bp deletion spanning entire gap
  1. *Regions where inversions and translocations of sequences occurred in sequenced C. hominis genomes.