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Table 2 Neoblast genes

From: Digital gene expression approach over multiple RNA-Seq data sets to detect neoblast transcriptional changes in Schmidtea mediterranea

Gene X1 X2 Xin p-val X1-Xin p-val X2-Xin Accession PubMed
Smed-bruli 212.57 122.68 0 2.20e-062 1.58e-035 DQ344977 16890156
Smed-chd4 159.84 18.34 13.69 5.91e-032 1.10e-001 GU980571 20223763
Smed-coe 10.16 0 0 9.77e-004 1 KF487109 25356635
Smed-cycD 18.95 0 0 1.91e-006 1 JX967267 23123964
Smed-dlx 5.22 0 0 3.12e-002 1 JN983829 21852957
Smed-e2f4-1 141.72 23.50 29.96 6.24e-018 7.79e-002 JX967265 23123964
Smed-egfr-3 19.50 0.57 0 1.91e-006 5.00e-001 HM777016 21458439
Smed-egr-1 510.01 37.26 153.20 9.16e-045 3.06e-017 JF914965 21846378
Smed-foxA 15.65 0 0 1.53e-005 1 JX010556 24737865
Smed-hdac-1 1086.49 0 60.77 4.19e-122 4.34e-019 JX967266 23123964
Smed-hnf4 30.21 8.31 8.56 3.85e-004 1.85e-001 JF802199 21566185
Smed-hsp60 113.43 10.32 33.38 8.64e-011 2.18e-004 GU591874 21356107
Smed-hsp70 326.28 0 11.13 3.98e-081 4.88e-004 GU591875 21356107
Smed-jnk 87.61 13.47 11.98 8.29e-016 1.55e-001 KC879720 24922054
Smed-lst8 43.12 1.43 0 1.14e-013 5.00e-001 JN815261 22479207
Smed-msh2 57.13 2.58 0 6.94e-018 1.25e-001 JF511467 21747960
Smed-nanos 39.27 1.15 0 1.82e-012 5.00e-001 EF153633 17390146
Smed-ncoa5 48.34 30.38 0 1.46e-011 5.96e-008 KF668097 24268775
Smed-nf-YB 11.26 2.58 0 4.88e-004 1.25e-001 HM100653 20844018
Smed-p53 5.22 5.73 0 3.12e-002 1.56e-002 AY068713 12421706
Smed-papbc 46.96 0 0 7.11e-015 1 HM100651 20844018
Smed-pbx 226.03 38.12 19.69 1.17e-044 6.41e-003 KC353351 23318635
Smed-pcna 728.63 24.08 0 3.51e-217 5.96e-008 EU856391 18786419
Smed-prmt5 43.67 0.57 0 5.68e-014 5.00e-001 JQ035529 22318224
Smed-prog-1 1.92 389.54 37.66 7.09e-010 7.42e-074 JX122762 18786419
Smed-runt-1 16.48 0 0 1.53e-005 1 JF720854 21846378
Smed-sd-1 14.28 0.57 0 6.10e-005 5.00e-001 KF990481 24523458
Smed-sd-2 4.67 0 0 3.12e-002 1 KF990482 24523458
Smed-smB 461.12 0 29.96 1.72e-099 9.31e-010 GU562964 20215344
Smed-smg-1 72.78 11.47 26.53 1.51e-006 4.38e-003 JF894292 22479207
Smed-soxP-1 15.11 3.15 0 3.05e-005 1.25e-001 JQ425151 22385657
Smed-sp6-9 38.72 0.57 0 1.82e-012 5.00e-001 JN983830 21852957
Smed-srf 40.37 0.29 16.26 5.78e-004 1.53e-005 JX010474 22549959
Smed-tert 19.22 0 0 1.91e-006 1 JF693290 22371573
Smed-tor 31.86 0 10.27 3.35e-004 9.77e-004 JF894291 22479207
Smed-vasa-1 1209.52 22.93 22.25 3.39e-162 1.17e-001 JQ425140 22385657
Smed-wi-1 644.59 13.47 0 6.01e-192 1.22e-004 DQ186985 16311336
Smed-wi-2 724.78 50.45 26.53 1.41e-176 2.90e-003 DQ186986 16311336
Smed-wi-3 433.93 76.82 21.40 9.76e-101 4.01e-009 EU586258 18456843
Smed-xin-11 26.64 0 0 7.45e-009 1 DQ851133 17670787
  1. X1, X2 and Xin DGE expression levels of already known and deeply characterized neoblast genes.