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Table 2 Neoblast genes

From: Digital gene expression approach over multiple RNA-Seq data sets to detect neoblast transcriptional changes in Schmidtea mediterranea

Gene

X1

X2

Xin

p-val X1-Xin

p-val X2-Xin

Accession

PubMed

Smed-bruli

212.57

122.68

0

2.20e-062

1.58e-035

DQ344977

16890156

Smed-chd4

159.84

18.34

13.69

5.91e-032

1.10e-001

GU980571

20223763

Smed-coe

10.16

0

0

9.77e-004

1

KF487109

25356635

Smed-cycD

18.95

0

0

1.91e-006

1

JX967267

23123964

Smed-dlx

5.22

0

0

3.12e-002

1

JN983829

21852957

Smed-e2f4-1

141.72

23.50

29.96

6.24e-018

7.79e-002

JX967265

23123964

Smed-egfr-3

19.50

0.57

0

1.91e-006

5.00e-001

HM777016

21458439

Smed-egr-1

510.01

37.26

153.20

9.16e-045

3.06e-017

JF914965

21846378

Smed-foxA

15.65

0

0

1.53e-005

1

JX010556

24737865

Smed-hdac-1

1086.49

0

60.77

4.19e-122

4.34e-019

JX967266

23123964

Smed-hnf4

30.21

8.31

8.56

3.85e-004

1.85e-001

JF802199

21566185

Smed-hsp60

113.43

10.32

33.38

8.64e-011

2.18e-004

GU591874

21356107

Smed-hsp70

326.28

0

11.13

3.98e-081

4.88e-004

GU591875

21356107

Smed-jnk

87.61

13.47

11.98

8.29e-016

1.55e-001

KC879720

24922054

Smed-lst8

43.12

1.43

0

1.14e-013

5.00e-001

JN815261

22479207

Smed-msh2

57.13

2.58

0

6.94e-018

1.25e-001

JF511467

21747960

Smed-nanos

39.27

1.15

0

1.82e-012

5.00e-001

EF153633

17390146

Smed-ncoa5

48.34

30.38

0

1.46e-011

5.96e-008

KF668097

24268775

Smed-nf-YB

11.26

2.58

0

4.88e-004

1.25e-001

HM100653

20844018

Smed-p53

5.22

5.73

0

3.12e-002

1.56e-002

AY068713

12421706

Smed-papbc

46.96

0

0

7.11e-015

1

HM100651

20844018

Smed-pbx

226.03

38.12

19.69

1.17e-044

6.41e-003

KC353351

23318635

Smed-pcna

728.63

24.08

0

3.51e-217

5.96e-008

EU856391

18786419

Smed-prmt5

43.67

0.57

0

5.68e-014

5.00e-001

JQ035529

22318224

Smed-prog-1

1.92

389.54

37.66

7.09e-010

7.42e-074

JX122762

18786419

Smed-runt-1

16.48

0

0

1.53e-005

1

JF720854

21846378

Smed-sd-1

14.28

0.57

0

6.10e-005

5.00e-001

KF990481

24523458

Smed-sd-2

4.67

0

0

3.12e-002

1

KF990482

24523458

Smed-smB

461.12

0

29.96

1.72e-099

9.31e-010

GU562964

20215344

Smed-smg-1

72.78

11.47

26.53

1.51e-006

4.38e-003

JF894292

22479207

Smed-soxP-1

15.11

3.15

0

3.05e-005

1.25e-001

JQ425151

22385657

Smed-sp6-9

38.72

0.57

0

1.82e-012

5.00e-001

JN983830

21852957

Smed-srf

40.37

0.29

16.26

5.78e-004

1.53e-005

JX010474

22549959

Smed-tert

19.22

0

0

1.91e-006

1

JF693290

22371573

Smed-tor

31.86

0

10.27

3.35e-004

9.77e-004

JF894291

22479207

Smed-vasa-1

1209.52

22.93

22.25

3.39e-162

1.17e-001

JQ425140

22385657

Smed-wi-1

644.59

13.47

0

6.01e-192

1.22e-004

DQ186985

16311336

Smed-wi-2

724.78

50.45

26.53

1.41e-176

2.90e-003

DQ186986

16311336

Smed-wi-3

433.93

76.82

21.40

9.76e-101

4.01e-009

EU586258

18456843

Smed-xin-11

26.64

0

0

7.45e-009

1

DQ851133

17670787

  1. X1, X2 and Xin DGE expression levels of already known and deeply characterized neoblast genes.