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Table 2 Twenty five pine genes most highly up-regulated by weevil feeding-induced damage

From: Activation of defence pathways in Scots pine bark after feeding by pine weevil (Hylobius abietis)

SEQ_ID a log2_FC b Adj. p -value Hit name c Hit description c E-VALUE
isotig14898 9.174 0.0034 AT1G73260 trypsin and protease inhibitor family protein/Kunitz family protein 2.00E-17
isotig08882 8.797 0.0038 AT1G72060 serine-type endopeptidase inhibitor 6.00E-06
isotig08888 8.748 0.0093 AT1G72060 serine-type endopeptidase inhibitor 5.00E-06
isotig14897 8.707 0.0034 AT1G73260 trypsin and protease inhibitor family protein/Kunitz family protein 2.00E-17
isotig11956 8.584 0.0034 AT1G73260 trypsin and protease inhibitor family protein/Kunitz family protein 3.00E-15
isotig15076 8.530 0.0038 AT5G05390 LAC12 (laccase 12); laccase 0
isotig08893 8.349 0.0041 AT1G72060 serine-type endopeptidase inhibitor 2.00E-06
isotig08890 8.341 0.0038 AT1G72060 serine-type endopeptidase inhibitor 3.00E-06
isotig00382 7.941 0.0042 No hit   
isotig00365 7.904 0.0038 No hit   
isotig14893 7.894 0.0083 AT1G73260 trypsin and protease inhibitor family protein/Kunitz family protein 2.00E-17
isotig27556 7.741 0.0050 AT2G45220 pectinesterase family protein 1.00E-125
isotig25461 7.710 0.0085 AT3G01420 ALPHA-DOX1, DOX1, DIOX1; lipoxygenase 1.00E-100
isotig08884 7.666 0.0034 AT1G72060 serine-type endopeptidase inhibitor 9.00E-08
isotig08898 7.602 0.0058 AT1G75620 glyoxal oxidase-related 1.00E-149
isotig35240 7.558 0.0069 AT1G14190 glucose-methanol-choline (GMC) oxidoreductase family protein 1.00E-128
isotig13645 7.541 0.0038 AT1G08080 ATACA7, ACA7 (ALPHA CARBONIC ANHYDRASE 7) 3.00E-59
isotig00361 7.493 0.0050 No hit   
isotig19954 7.452 0.0093 AT3G22400 LOX5; electron carrier/ iron ion binding/lipoxygenase/metal ion binding/oxidoreductase 0
isotig13655 7.427 0.0051 AT4G16260 catalytic/ cation binding/hydrolase, hydrolyzing O-glycosyl compounds 3.00E-78
isotig00384 7.332 0.0136 No hit   
isotig15012 7.268 0.0041 AT1G64160 disease resistance-responsive family protein/dirigent family protein 7.00E-47
isotig15009 7.250 0.0094 AT1G64160 disease resistance-responsive family protein/dirigent family protein 7.00E-47
isotig41906 7.234 0.0091 AT2G21050 amino acid permease, putative 1.00E-118
isotig40293 7.127 0.0058 AT4G23340 oxidoreductase, 2OG-Fe(II) oxygenase family protein 2.00E-42
  1. aSeq_IDs correspond to the names of the sequences in the PtNewbler1 assembly available from the Conifer DBMagic database [47]. bBinary logarithm of the fold change value. cCorrespond to the best hit of BLASTX searches against The Arabidopsis Information Resources (TAIR) database.