Transcriptome assembly, profiling and differential gene expression analysis of the halophyte Suaeda fruticosa provides insights into salt tolerance

Table 1 Statistics of reads

Reads preparation	Libraries	Number of reads	Total reads
Raw reads	R000	95,248,764	335,271,656
	S000	75,414,804
	R300	84,162,958
	S300	80,445,130
FastX toolkit and Trimmomatic	R000	68,444,064	292,898,120
	S000	68,872,348
	R300	79,313,812
	S300	76,267,896
Sickle Trimmed	All		283,587,292
Digital Normalization	All		99,577,045

The summaries of the pre-assembly methods are indicated. R000 represents roots in 0 mM NaCl treatment, S000 are shoots in 0 mM NaCl treatment, R300 are roots in 300 mM NaCl treatment and S300 are shoots in 300 mM NaCl treatment.

ISSN: 1471-2164