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Table 2 Statistics of sequence assembly

From: Transcriptome assembly, profiling and differential gene expression analysis of the halophyte Suaeda fruticosa provides insights into salt tolerance

  Contigs Scaffolds Unigenes
Number of sequences 296,766 273,824 54,526
N50 (bp) 1,548 1,669 957
Mean length (bp) 928 1,012 764
Total length (bp) 275,319,083 277,056,733 41,651,347
  1. The table shows the summary of de novo sequence assembly after using Velvet for contig assembly, Oases for Scaffolds then CDHIT-EST and Transdecoder for the unigenes determination.