From: Identification and distribution of the NBS-LRR gene family in the Cassava genome
Predicted domains | Letter code | Manihot esculenta | Oriza sativa | Populus trichocarpa | Arabidopsis thaliana |
---|---|---|---|---|---|
CNL Type | Â | Â | Â | Â | Â |
NB | NCC | 10 | 25 | 27 | 1 |
CC NB | CN | 11 | 7 | 19 | 5 |
CC NB LRR | CNL | 117 | 160 | 119 | 51 |
NB LRR | NLCC | 43 | 16 | 71 | 4 |
Other | - | N/A* | 264 | 43 | 1 |
TNL Type | Â | Â | Â | Â | Â |
NB | NTIR | 4 | - | 19 | - |
TIR NB | TN | 5 | 3 | 13 | 21 |
TIR NB LRR | TNL | 29 | - | 64 | 83 |
NB LRR | NLTIR | 9 | - | 12 | 2 |
Other | - | N/A* | N/A* | 15 | 39 |
Partial | P | 99 | 60 | N/A* | N/A* |
Total | Â | 327 | 535 | 402 | 207 |
# of genes in the genome | Â | 30666 | 37544 | 45550 | 25498 |
Genome size | Â | ~760Â Mb | 389Â Mb | 485Â Mb | 125Â Mb |