Skip to main content

Table 1 NBS-LRR genes and their classification in different genomes

From: Identification and distribution of the NBS-LRR gene family in the Cassava genome

Predicted domains

Letter code

Manihot esculenta

Oriza sativa

Populus trichocarpa

Arabidopsis thaliana

CNL Type

     

NB

NCC

10

25

27

1

CC NB

CN

11

7

19

5

CC NB LRR

CNL

117

160

119

51

NB LRR

NLCC

43

16

71

4

Other

-

N/A*

264

43

1

TNL Type

     

NB

NTIR

4

-

19

-

TIR NB

TN

5

3

13

21

TIR NB LRR

TNL

29

-

64

83

NB LRR

NLTIR

9

-

12

2

Other

-

N/A*

N/A*

15

39

Partial

P

99

60

N/A*

N/A*

Total

 

327

535

402

207

# of genes in the genome

 

30666

37544

45550

25498

Genome size

 

~760 Mb

389 Mb

485 Mb

125 Mb

  1. Source: This article IRGSP (2005); (Yang et al. [26]); (Meyers et al. [22]); (Zhou et al., [25]).
  2. *Not Analyzed.