Skip to main content
Figure 6 | BMC Genomics

Figure 6

From: An empirical strategy to detect bacterial transcript structure from directional RNA-seq transcriptome data

Figure 6

Pipeline for operon organization analysis and summary for S. Typhimurium 14028s. (A) Classification of operons. The parameters are described in more detail in the Methods. (B) Summary of S. Typhimurium 14028s operons divided into three categories and the proportion that had TSSs and/or TTSs detected. The pie chart below shows the co-expression of genes within the same multiple-gene operons. Operons with high co-expression are those with an average co-expression PCC > 0.5 between adjacent genes. Others refer to operons with an average co-expression PCC <0.5 between adjacent genes, or those with genes that were lowly expressed or not expressed under any condition.

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us