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Table 3 Quantitative distribution of the non-redundant BAC MTP sequences across regions of chromosome 5

From: Homologues of potato chromosome 5 show variable collinearity in the euchromatin, but dramatic absence of sequence similarity in the pericentromeric heterochromatin

 

bp per chromosome region

 

Sequence haplotype

North euchromatin

North heterochromatin

Central heterochromatin

South heterochromatin

South euchromatin

Totals

RH homozygous

1,364,250

   

1,300,000 (a)

2,664,250

RH unknown

  

132,838

  

132,838

RH haplotype {0}

4,884,186

4,819,059

14,443,961

1,193,223

2,552,327

27,892,756

RH haplotype {1}

5,519,970

4,328,956

12,886,551

578,280

1,443,101

24,756,858

RH totals

11,768,406

9,148,015

27,463,350

1,771,503

5,295,428

55,446,702

DM sequence

9,973,565

12,734,159

17,195,885

1,791,234

7,825,315

49,520,158

  1. (a) Estimated length of homozygous sequence incorporated in haplotype {0} MTP 6915 and haplotype {1} MTP 6844.
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BMC Genomics

ISSN: 1471-2164

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