Table 6 Description of the novel LTR retrotransposons taxonomy and family members
From: Characterization of repetitive DNA landscape in wheat homeologous group 4 chromosomes
Sequence accession | JROL01007197 | JROL01007734 | JROL01000922 | JROL01008273 | JROL01006440 | JROL01007833 |
|---|---|---|---|---|---|---|
Family | Genoveva | Carmen | Facunda | Francisca | Victoria | Gabrielle |
Superfamily | Copia | Copia | Copia | Gypsy | Â | Â |
Class | Retrotransposon | Retrotransposon | Retrotransposon | Retrotransposon | Retrotransposon | Retrotransposon |
Order | LTR retrotransposon | LTR retrotransposon | LTR retrotransposon | LTR retrotransposon | LTR retrotransposon | LTR retrotransposon |
Insertion | RLC_Genoveva_JROL01007197 | RLC_Carmen_JROL01007734 | RLC_Facunda_JROL01000922 | RLG_Francisca_JROL01008273 | RLX_Victoria_JROL01006440 | RLX_Gabrielle_JROL01007833 |
Structural description | Autonomous retrotransposon | Autonomous retrotransposon | Autonomous retrotransposon | Autonomous retrotransposon | Non autonomous retrotransposon (TRIM) | Non autonomous retrotransposon (TRIM) |
Others members | See Additional file 5: Tables S4 and Additional file 6: Table S5 | See Additional file 5: Tables S4 and Additional file 6: Table S5 | See Additional file 5: Tables S4 and Additional file 6: Table S5 | See Additional file 5: Tables S4 and Additional file 6: Table S5 | See Additional file 5: Tables S4 and Additional file 6: Table S5 | See Additional file 5: Tables S4 and Additional file 6: Table S5 |