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Table 1 Description of candidate genes and interrogated SNP

From: Non-synonymous mutations mapped to chromosome X associated with andrological and growth traits in beef cattle

Gene Gene position (chromosome - bp)* SNP location (chromosome - bp) NCBI SNP number Variation (5’orientation) Position in CDS Position in protein Aminoacid substitution
TEKT4 25: 871,130..877,122 874,677 rs109315777 T/A 584 195 M/K
LOC100138021 X:49,737,023..49,737,868 49,737,296 rs461402021 G/C 573 191 I/M
CENPI X:54,969,324..55,038,297 54,971,267 rs134782295 G/A 143 48 S/N
TAF7L** X:55,127,019..55,144,665 55,133,975 rs445729496 C/T 829/535 277/179 A/T
NXF2 X:55,592,336..55,604,610 55,602,546 ss1026566625 T/C 661 221 N/D
CYLC1 X:69,903,617..69,933,552 69,914,225 rs477320469 T/A 818 273 Y/F
UXT X:91,468,065..91,474,474 91,472,521 rs132821996 C/T 344 115 S/N
SPACA5 X:92,799,368..92,801,705 92,801,539 rs211186307 C/T 109 37 G/S
  1. *position in UMD3.1(Ensembl)
  2. **gene with splicing variants