Skip to main content

Table 2 Global properties of P. falciparum lncRNAs include reduced expression, length, GC content, and splicing as compared to annotated transcripts

From: Strand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA

 

LncRNA

Antisense

Annotated

Average of maximum FPKMs

56

25

469

Average of average FPKMs

18

8

164

Average Length

1218

1413

2197

Average GC content

15.0 %

21.8 %

25.4 %

Single exon rate

93.5 %

89.5 %

47.8 %

Maximum exon count

3

5

34

  1. We calculated the average of maximum FPKMs and average of average FPKMs across each transcript class during the 56-hour time course. Average length and average GC content reflect exonic sequence only. Annotated transcript properties refer to PlasmoDBv10.0 transcript models
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us