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Table 2 The Kyoto encyclopedia of gene and genomes (KEGG) pathways affected by DBM in P-type B. vulgaris

From: Expression patterns, molecular markers and genetic diversity of insect-susceptible and resistant Barbarea genotypes by comparative transcriptome analysis

Kegg_pathway ko_id DifferentFr N out of 758 GenomeFr N out of 14269 P-value Corrected P-value
Nitrogen metabolism ko00910 17 (2.24 %) 80 (0.56 %) 7.75E-7 1.56E-4
Phenylpropanoid biosynthesis ko00940 14 (1.85 %) 86 (0.60 %) 1.62E-4 0.0326
Photosynthesis - antenna proteins ko00196 11 (1.45 %) 57 (0.40 %) 1.73 E-4 0.0348
Flavonoid biosynthesis ko00941 7 (0.92 %) 25 (0.18 %) 2.40 E-4 0.0483
alpha-Linolenic acid metabolism ko00592 8 (1.06 %) 38 (0.27 %) 7.21 E-4 0.145
Phenylalanine metabolism ko00360 11 (1.45 %) 78 (0.55 %) 2.65E-3 0.533
Mineral absorption ko04978 4 (0.53 %) 12 (0.08 %) 2.78 E-3 0.558
Sesquiterpenoid biosynthesis ko00909 2 (0.26 %) 2 (0.014 %) 2.82 E-3 0.567
Stilbenoid, diarylheptanoid and gingerol biosynthesis ko00945 7 (0.92 %) 43 (0.30 %) 7.02 E-3 1
Alanine, aspartate and glutamate metabolism ko00250 9 (1.19 %) 65(0.46 %) 7.11 E-3 1
Circadian rhythm - plant ko04712 6 (0.79 %) 33 (0.23 %) 7.13 E-3 1
Aminobenzoate degradation ko00627 7 (0.92 %) 47 (0.33 %) 0.0114 1
Valine, leucine and isoleucine biosynthesis ko00290 10 (1.32 %) 83 (0.58 %) 0.0123 1
Glycan binding proteins ko04091 4 (0.53 %) 18 (0.13 %) 0.0133 1
D-Glutamine and D-glutamate metabolism ko00471 2 (0.26 %) 4 (0.028 %) 0.0157 1
Glucosinolate biosynthesis ko00966 3 (0.39 %) 12 (0.084 %) 0.0229 1
Arginine and proline metabolism ko00330 11(1.45 %) 105( 0.74 %) 0.0235 1
Sulfur metabolism ko00920 6 (0.79 %) 43 (0.30 %) 0.0251 1
Photosynthesis proteins ko00194 16 (2.11 %) 180 (1.26 %) 0.0303 1
beta-Alanine metabolism ko00410 6 (0.79 %) 48 (0.34 %) 0.0405 1
Tryptophan metabolism ko00380 8 (1.06 %) 75 (0.53 %) 0.0450 1
Zeatin biosynthesis ko00908 3 (0.40 %) 16 (0.11 %) 0.0498 1
Protein processing in endoplasmic reticulum ko04141 18 (2.37 %) 223 (1.56 %) 0.0509 1
  1. DifferentFr, differentially expressed frequency, indicating the number and percentage of differentially expressed genes in each cluster; GenomeFr, genome frequency, indicating the number and percentage of the transcriptome distributed in each cluster.