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Table 4 Changes in abundance of transcripts involved in ABA biosynthesis, catabolism and signaling

From: Glyphosate’s impact on vegetative growth in leafy spurge identifies molecular processes and hormone cross-talk associated with increased branching

Category

Gene ID Abv.

Gene ID

log2 FC

TAIR ID

Component number

ABA

AAO4

ALDEHYDE OXIDASE 4

−1.31

AT1G04580.1

comp67916_c0

biosynthesis

ABA2

ABA DEFICIENT 2

1.92

AT1G52340.1

comp64618_c0

 

ABA2

ABA DEFICIENT 2

−1.06

AT1G52340.1

comp67801_c0

 

ABA2

ABA DEFICIENT 2

4.64

AT1G52340.1

comp69765_c0

 

NCED3

NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3

2.27

AT3G14440.1

comp62453_c0

ABA

CYP707A3

CYTOCHROME P450, FAMILY 707

−5.55

AT5G45340.1

comp48367_c0

catabolism

UGT71B1

UDP-GLUCOSYL TRANSFERASE 71B1

−1.35

AT3G21750.1

comp63205_c0

 

UGT71B1

UDP-GLUCOSYL TRANSFERASE 71B1

−1.53

AT3G21750.1

comp78910_c1

ABA

ABF1

ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FAC 1

−2.19

AT1G49720.2

comp81822_c0

signaling

AP2C1

PP2C-TYPE PHOSPHATASE

−1.58

AT2G30020.1

comp71725_c1

 

CDPK1A

CALCIUM-DEPENDENT PROTEIN KINASE 1A

−1.21

AT1G74740.1

comp82371_c2

 

COR6.6

COLD-RESPONSIVE 6.6

2.52

AT5G15970.1

comp63310_c0

 

DREB1D

DEHYDRATION-RESPONSIVE ELEMENT-BINDING 1D

1.30

AT5G51990.1

comp72894_c0

 

HB6

HOMEOBOX PROTEIN 6

1.07

AT2G22430.1

comp68807_c1

 

PLDALPHA1

PHOSPHOLIPASE D ALPHA 1

1.37

AT3G15730.1

comp79335_c0

 

RCAR10

REGULATORY COMPONENTS OF ABA RECEPTOR 10

2.37

AT2G38310.1

comp66032_c0

  1. Transcript changes after foliar glyphosate treatment (2.24 kg ha−1) compared to controls in aerial tissues derived from crown buds of leafy spurge. The Arabidopsis Information Resource was used to annotate homologs of leafy spurge transcripts (TAIR ID), to obtain gene IDs and abbreviations (Abv.); values represent log2 fold changes (FC)