Skip to main content

Table 4 Changes in abundance of transcripts involved in ABA biosynthesis, catabolism and signaling

From: Glyphosate’s impact on vegetative growth in leafy spurge identifies molecular processes and hormone cross-talk associated with increased branching

Category Gene ID Abv. Gene ID log2 FC TAIR ID Component number
ABA AAO4 ALDEHYDE OXIDASE 4 −1.31 AT1G04580.1 comp67916_c0
biosynthesis ABA2 ABA DEFICIENT 2 1.92 AT1G52340.1 comp64618_c0
  ABA2 ABA DEFICIENT 2 −1.06 AT1G52340.1 comp67801_c0
  ABA2 ABA DEFICIENT 2 4.64 AT1G52340.1 comp69765_c0
  NCED3 NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3 2.27 AT3G14440.1 comp62453_c0
ABA CYP707A3 CYTOCHROME P450, FAMILY 707 −5.55 AT5G45340.1 comp48367_c0
catabolism UGT71B1 UDP-GLUCOSYL TRANSFERASE 71B1 −1.35 AT3G21750.1 comp63205_c0
  UGT71B1 UDP-GLUCOSYL TRANSFERASE 71B1 −1.53 AT3G21750.1 comp78910_c1
ABA ABF1 ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FAC 1 −2.19 AT1G49720.2 comp81822_c0
signaling AP2C1 PP2C-TYPE PHOSPHATASE −1.58 AT2G30020.1 comp71725_c1
  CDPK1A CALCIUM-DEPENDENT PROTEIN KINASE 1A −1.21 AT1G74740.1 comp82371_c2
  COR6.6 COLD-RESPONSIVE 6.6 2.52 AT5G15970.1 comp63310_c0
  DREB1D DEHYDRATION-RESPONSIVE ELEMENT-BINDING 1D 1.30 AT5G51990.1 comp72894_c0
  HB6 HOMEOBOX PROTEIN 6 1.07 AT2G22430.1 comp68807_c1
  PLDALPHA1 PHOSPHOLIPASE D ALPHA 1 1.37 AT3G15730.1 comp79335_c0
  RCAR10 REGULATORY COMPONENTS OF ABA RECEPTOR 10 2.37 AT2G38310.1 comp66032_c0
  1. Transcript changes after foliar glyphosate treatment (2.24 kg ha−1) compared to controls in aerial tissues derived from crown buds of leafy spurge. The Arabidopsis Information Resource was used to annotate homologs of leafy spurge transcripts (TAIR ID), to obtain gene IDs and abbreviations (Abv.); values represent log2 fold changes (FC)