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Table 1 Sample comparisons and differentially expressed genes

From: RNA-seq analysis reveals genetic response and tolerance mechanisms to ozone exposure in soybean

Sample 1 Sample 2 Time Point Label Diff. Expressed Genes
Mandarin-Ottawa Low Exposure Mandarin-Ottawa High Exposure 1 ML-MH-1 275
Mandarin-Ottawa Low Exposure Mandarin-Ottawa High Exposure 2 ML-MH-2 135
Mandarin-Ottawa Low Exposure Mandarin-Ottawa High Exposure 3 ML-MH-3 215
Mandarin-Ottawa Low Exposure Mandarin-Ottawa High Exposure 4 ML-MH-4 183
Fiskeby Low Exposure Fiskeby High Exposure 1 FL-FH-1 384
Fiskeby Low Exposure Fiskeby High Exposure 2 FL-FH-2 88
Fiskeby Low Exposure Fiskeby High Exposure 3 FL-FH-3 129
Fiskeby Low Exposure Fiskeby High Exposure 4 FL-FH-4 139
Fiskeby High Exposure Mandarin-Ottawa High Exposure 1 FH-MH-1 310
Fiskeby High Exposure Mandarin-Ottawa High Exposure 2 FH-MH-2 332
Fiskeby High Exposure Mandarin-Ottawa High Exposure 3 FH-MH-3 258
Fiskeby High Exposure Mandarin-Ottawa High Exposure 4 FH-MH-4 536
  1. A description of comparisons between samples and labeling methodology. The total number of differentially expressed genes identified by cuffdiff is also shown
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