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Table 1 Assembly statistics of contigs and scaffolds generated using the three sequencing platforms Illumina HiSeq2000, 454 GS FLX and SOLiD 5500XL

From: Unravelling the genome of Holy basil: an “incomparable” “elixir of life” of traditional Indian medicine

Description Contigs Scaffolds GapClosed scaffolds Super-scaffolds
Contigs generated 107785 22776 22776 9059
Maximum Contig Length 115044 414711 411690 2211552
Minimum Contig Length 147 200 200 200
Average Contig Length 3454 16984 16629 44354
Total Contigs Length 372395755 386828951 378759759 401803260
Total Number of non-ATGC characters 0 17898452 2665702 26110056
Percentage of non-ATGC characters 0 4.627 0.704 6.498
Contigs > = 1 Kb 43174 14791 14769 4159
Contigs > = 10 Kb 11594 7544 7407 2357
N50 value 12769 61854 61242 303233
N90 value 2071 12742 12534 73672