Skip to main content

Table 1 Putative biosynthetic gene clusters for specialised metabolites

From: The Streptomyces leeuwenhoekii genome: de novo sequencing and assembly in single contigs of the chromosome, circular plasmid pSLE1 and linear plasmid pSLE2

antiSMASH Cluster No. antiSMASH type descriptor Position (manually annotated clusters in italics) Our annotation (based on Ref.)
From To
1 T1pks 99264 143430  
  Not identified 160425 189028 Hygromycin A [11, 44]
2 T1pks 191701 240196  
3 T1pks-nrps 324784 392261  
4 Nrps 379508 426758  
5 T3pks 416888 458084  
6 Bacteriocin 572464 582679  
7 Terpene 598795 619823  
  Not identified 684373 654830 Lasso-peptide 2
8 Nrps 714060 794426  
9 Terpene 1056004 1076960  
10 T2pks-transatpks-nrps 1075399 1155931 Halogenated polyketide [Razmilic et al.]
11 T1pks-terpene 1211049 1289829 Chaxamycin [Castro et al.]
12 T1pks 1497127 1544539  
13 Terpene 1624097 1645110  
14 T1pks-siderophore 1776281 1833813  
15 Terpene 1972277 1994487  
16 Bacteriocin 2013690 2025087  
17 Siderophore 2293580 2305424 Highly conserved
18 Nrps-t1pks 2668194 2719415  
19 T3pks 2937137 2978264  
20 Terpene 3056325 3058819 Albaflavenone [45, 46]
  Not identified 3560196 3564842 Lasso-peptide 1
21 Siderophore 5237176 5244356 Desferrioxamine E [11, 47, 48]
22 Melanin 5330379 5340933  
23 Amglyccycl-butyrolactone 5385171 5417416  
24 Ectoine 6176293 6186691  
25 Other 6710095 6751819  
26 T3pks 6822979 6864043  
27 T1pks 7141058 7240871 Chaxalactin [11, Castro et al.]
28 T1pks 7355977 7439461  
29 Other 7486047 7529121  
30 Terpene-t2pks 7530162 7588405  
31 Terpene 7744176 7768730  
  Not identified pSLE2 103389 pSLE2 105999 Lasso-peptide 3
\