TY - JOUR AU - Boorse, G. C. AU - Denver, R. J. PY - 2003 DA - 2003// TI - Endocrine mechanisms underlying plasticity in metamorphic timing in spadefoot toads JO - Integr Comp Biol VL - 43 UR - https://doi.org/10.1093/icb/43.5.646 DO - 10.1093/icb/43.5.646 ID - Boorse2003 ER - TY - JOUR AU - Neiman, A. M. PY - 2011 DA - 2011// TI - Sporulation in the budding yeast Saccharomyces cerevisiae JO - Genetics VL - 189 UR - https://doi.org/10.1534/genetics.111.127126 DO - 10.1534/genetics.111.127126 ID - Neiman2011 ER - TY - JOUR AU - Sommer, R. J. AU - Ogawa, A. PY - 2011 DA - 2011// TI - Hormone signaling and phenotypic plasticity in nematode development and evolution JO - Curr Biol CB VL - 21 UR - https://doi.org/10.1016/j.cub.2011.06.034 DO - 10.1016/j.cub.2011.06.034 ID - Sommer2011 ER - TY - JOUR AU - Gluckman, P. D. AU - Hanson, M. A. AU - Beedle, A. S. PY - 2007 DA - 2007// TI - Early life events and their consequences for later disease: a life history and evolutionary perspective JO - Am J Hum Biol Off J Hum Biol Counc VL - 19 UR - https://doi.org/10.1002/ajhb.20590 DO - 10.1002/ajhb.20590 ID - Gluckman2007 ER - TY - JOUR AU - Barker, D. J. P. PY - 2007 DA - 2007// TI - The origins of the developmental origins theory JO - J Intern Med VL - 261 UR - https://doi.org/10.1111/j.1365-2796.2007.01809.x DO - 10.1111/j.1365-2796.2007.01809.x ID - Barker2007 ER - TY - JOUR AU - Gluckman, P. D. AU - Cutfield, W. AU - Hofman, P. AU - Hanson, M. A. PY - 2005 DA - 2005// TI - The fetal, neonatal, and infant environments-the long-term consequences for disease risk JO - Early Hum Dev VL - 81 UR - https://doi.org/10.1016/j.earlhumdev.2004.10.003 DO - 10.1016/j.earlhumdev.2004.10.003 ID - Gluckman2005 ER - TY - JOUR AU - Langley, S. C. AU - Jackson, A. A. PY - 1994 DA - 1994// TI - Increased systolic blood pressure in adult rats induced by fetal exposure to maternal low protein diets JO - Clin Sci Lond Engl 1979 VL - 86 ID - Langley1994 ER - TY - JOUR AU - Roseboom, T. J. AU - Painter, R. C. AU - Abeelen, A. F. M. AU - Veenendaal, M. V. E. AU - Rooij, S. R. PY - 2011 DA - 2011// TI - Hungry in the womb: what are the consequences? Lessons from the Dutch famine JO - Maturitas VL - 70 UR - https://doi.org/10.1016/j.maturitas.2011.06.017 DO - 10.1016/j.maturitas.2011.06.017 ID - Roseboom2011 ER - TY - JOUR AU - Gupta, P. AU - Narang, M. AU - Banerjee, B. D. AU - Basu, S. PY - 2004 DA - 2004// TI - Oxidative stress in term small for gestational age neonates born to undernourished mothers: a case control study JO - BMC Pediatr VL - 4 UR - https://doi.org/10.1186/1471-2431-4-14 DO - 10.1186/1471-2431-4-14 ID - Gupta2004 ER - TY - JOUR AU - Lévy-Marchal, C. AU - Czernichow, P. PY - 2006 DA - 2006// TI - Small for gestational age and the metabolic syndrome: which mechanism is suggested by epidemiological and clinical studies? JO - Horm Res VL - 65 UR - https://doi.org/10.1159/000091517 DO - 10.1159/000091517 ID - Lévy-Marchal2006 ER - TY - JOUR AU - Mahajan, S. D. AU - Singh, S. AU - Shah, P. AU - Gupta, N. AU - Kochupillai, N. PY - 2004 DA - 2004// TI - Effect of maternal malnutrition and anemia on the endocrine regulation of fetal growth JO - Endocr Res VL - 30 UR - https://doi.org/10.1081/ERC-200027380 DO - 10.1081/ERC-200027380 ID - Mahajan2004 ER - TY - JOUR AU - Painter, R. C. AU - Roseboom, T. J. AU - Bleker, O. P. PY - 2005 DA - 2005// TI - Prenatal exposure to the Dutch famine and disease in later life: an overview JO - Reprod Toxicol Elmsford N VL - 20 UR - https://doi.org/10.1016/j.reprotox.2005.04.005 DO - 10.1016/j.reprotox.2005.04.005 ID - Painter2005 ER - TY - JOUR AU - Pelegri, F. PY - 2003 DA - 2003// TI - Maternal factors in zebrafish development JO - Dev Dyn VL - 228 UR - https://doi.org/10.1002/dvdy.10390 DO - 10.1002/dvdy.10390 ID - Pelegri2003 ER - TY - JOUR AU - Hong, S. -. K. AU - Levin, C. S. AU - Brown, J. L. AU - Wan, H. AU - Sherman, B. T. AU - Huang, D. AU - Lempicki, R. A. AU - Feldman, B. PY - 2010 DA - 2010// TI - Pre-gastrula expression of zebrafish extraembryonic genes JO - BMC Dev Biol VL - 10 UR - https://doi.org/10.1186/1471-213X-10-42 DO - 10.1186/1471-213X-10-42 ID - Hong2010 ER - TY - JOUR AU - Carvalho, L. AU - Heisenberg, C. -. P. PY - 2010 DA - 2010// TI - The yolk syncytial layer in early zebrafish development JO - Trends Cell Biol VL - 20 UR - https://doi.org/10.1016/j.tcb.2010.06.009 DO - 10.1016/j.tcb.2010.06.009 ID - Carvalho2010 ER - TY - JOUR AU - Jardine, D. AU - Litvak, M. K. PY - 2003 DA - 2003// TI - Direct yolk sac volume manipulation of zebrafish embryos and the relationship between offspring size and yolk sac volume JO - J Fish Biol VL - 63 UR - https://doi.org/10.1046/j.1095-8649.2003.00161.x DO - 10.1046/j.1095-8649.2003.00161.x ID - Jardine2003 ER - TY - JOUR AU - Mizuno, T. AU - Yamaha, E. AU - Kuroiwa, A. AU - Takeda, H. PY - 1999 DA - 1999// TI - Removal of vegetal yolk causes dorsal deficencies and impairs dorsal-inducing ability of the yolk cell in zebrafish JO - Mech Dev VL - 81 UR - https://doi.org/10.1016/S0925-4773(98)00202-0 DO - 10.1016/S0925-4773(98)00202-0 ID - Mizuno1999 ER - TY - JOUR AU - Spence, R. AU - Gerlach, G. AU - Lawrence, C. AU - Smith, C. PY - 2008 DA - 2008// TI - The behaviour and ecology of the zebrafish, Danio rerio JO - Biol Rev Camb Philos Soc VL - 83 UR - https://doi.org/10.1111/j.1469-185X.2007.00030.x DO - 10.1111/j.1469-185X.2007.00030.x ID - Spence2008 ER - TY - JOUR AU - Biro, F. M. AU - Wien, M. PY - 2010 DA - 2010// TI - Childhood obesity and adult morbidities JO - Am J Clin Nutr VL - 91 UR - https://doi.org/10.3945/ajcn.2010.28701B DO - 10.3945/ajcn.2010.28701B ID - Biro2010 ER - TY - JOUR AU - Marioni, J. C. AU - Mason, C. E. AU - Mane, S. M. AU - Stephens, M. AU - Gilad, Y. PY - 2008 DA - 2008// TI - RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays JO - Genome Res VL - 18 UR - https://doi.org/10.1101/gr.079558.108 DO - 10.1101/gr.079558.108 ID - Marioni2008 ER - TY - JOUR AU - Ashburner, M. AU - Ball, C. A. AU - Blake, J. A. AU - Botstein, D. AU - Butler, H. AU - Cherry, J. M. AU - Davis, A. P. AU - Dolinski, K. AU - Dwight, S. S. AU - Eppig, J. T. AU - Harris, M. A. AU - Hill, D. P. AU - Issel-Tarver, L. AU - Kasarskis, A. AU - Lewis, S. AU - Matese, J. C. AU - Richardson, J. E. AU - Ringwald, M. AU - Rubin, G. M. AU - Sherlock, G. PY - 2000 DA - 2000// TI - Gene ontology: tool for the unification of biology JO - the Gene Ontology Consortium Nat Genet VL - 25 ID - Ashburner2000 ER - TY - JOUR AU - Hölttä-Vuori, M. AU - Salo, V. T. V. AU - Nyberg, L. AU - Brackmann, C. AU - Enejder, A. AU - Panula, P. AU - Ikonen, E. PY - 2010 DA - 2010// TI - Zebrafish: gaining popularity in lipid research JO - Biochem J VL - 429 UR - https://doi.org/10.1042/BJ20100293 DO - 10.1042/BJ20100293 ID - Hölttä-Vuori2010 ER - TY - JOUR AU - Appelhoff, R. J. AU - Tian, Y. -. M. AU - Raval, R. R. AU - Turley, H. AU - Harris, A. L. AU - Pugh, C. W. AU - Ratcliffe, P. J. AU - Gleadle, J. M. PY - 2004 DA - 2004// TI - Differential function of the prolyl hydroxylases PHD1, PHD2, and PHD3 in the regulation of hypoxia-inducible factor JO - J Biol Chem VL - 279 UR - https://doi.org/10.1074/jbc.M406026200 DO - 10.1074/jbc.M406026200 ID - Appelhoff2004 ER - TY - JOUR AU - Taylor, M. S. PY - 2001 DA - 2001// TI - Characterization and comparative analysis of the EGLN gene family JO - Gene VL - 275 UR - https://doi.org/10.1016/S0378-1119(01)00633-3 DO - 10.1016/S0378-1119(01)00633-3 ID - Taylor2001 ER - TY - JOUR AU - Gourvas, V. AU - Sifakis, S. AU - Dalpa, E. AU - Soulitzis, N. AU - Koukoura, O. AU - Spandidos, D. A. PY - 2010 DA - 2010// TI - Reduced placental prolyl hydroxylase 3 mRNA expression in pregnancies affected by fetal growth restriction JO - BJOG Int J Obstet Gynaecol VL - 117 UR - https://doi.org/10.1111/j.1471-0528.2010.02735.x DO - 10.1111/j.1471-0528.2010.02735.x ID - Gourvas2010 ER - TY - JOUR AU - Ito, T. AU - Tanabe, K. AU - Nakamura, A. AU - Funamoto, K. AU - Aoyagi, A. AU - Sato, K. AU - Hoshiai, T. AU - Suenaga, K. AU - Sugawara, J. AU - Nagase, S. AU - Okamura, K. AU - Yaegashi, N. AU - Kimura, Y. PY - 2011 DA - 2011// TI - Aberrant expression of hypoxia-inducible factor 1α in the fetal heart is associated with maternal undernutrition JO - Tohoku J Exp Med VL - 224 UR - https://doi.org/10.1620/tjem.224.163 DO - 10.1620/tjem.224.163 ID - Ito2011 ER - TY - JOUR AU - Ito, T. AU - Funamoto, K. AU - Sato, N. AU - Nakamura, A. AU - Tanabe, K. AU - Hoshiai, T. AU - Suenaga, K. AU - Sugawara, J. AU - Nagase, S. AU - Okamura, K. AU - Yaegashi, N. AU - Kimura, Y. PY - 2012 DA - 2012// TI - Maternal undernutrition induces the expression of hypoxia-related genes in the fetal brain JO - Tohoku J Exp Med VL - 226 UR - https://doi.org/10.1620/tjem.226.37 DO - 10.1620/tjem.226.37 ID - Ito2012 ER - TY - JOUR AU - Taniguchi, C. M. AU - Finger, E. C. AU - Krieg, A. J. AU - Wu, C. AU - Diep, A. N. AU - LaGory, E. L. AU - Wei, K. AU - McGinnis, L. M. AU - Yuan, J. AU - Kuo, C. J. AU - Giaccia, A. J. PY - 2013 DA - 2013// TI - Cross-talk between hypoxia and insulin signaling through Phd3 regulates hepatic glucose and lipid metabolism and ameliorates diabetes JO - Nat Med VL - 19 UR - https://doi.org/10.1038/nm.3294 DO - 10.1038/nm.3294 ID - Taniguchi2013 ER - TY - JOUR AU - Minchenko, O. AU - Opentanova, I. AU - Minchenko, D. AU - Ogura, T. AU - Esumi, H. PY - 2004 DA - 2004// TI - Hypoxia induces transcription of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase-4 gene via hypoxia-inducible factor-1α activation JO - FEBS Lett VL - 576 UR - https://doi.org/10.1016/j.febslet.2004.08.053 DO - 10.1016/j.febslet.2004.08.053 ID - Minchenko2004 ER - TY - JOUR AU - Xu, G. AU - Chen, J. AU - Jing, G. AU - Shalev, A. PY - 2013 DA - 2013// TI - Thioredoxin-interacting protein regulates insulin transcription through microRNA-204 JO - Nat Med VL - 19 UR - https://doi.org/10.1038/nm.3287 DO - 10.1038/nm.3287 ID - Xu2013 ER - TY - STD TI - Nishiguchi R, Azuma M, Yokobori E, Uchiyama M, Matsuda K. Gonadotropin-releasing hormone 2 suppresses food intake in the zebrafish, Danio rerio. Front Endocrinol. 2012;3. ID - ref31 ER - TY - JOUR AU - Qiao, N. AU - Huang, Y. AU - Naveed, H. AU - Green, C. D. AU - Han, J. -. D. J. PY - 2013 DA - 2013// TI - CoCiter: An Efficient Tool to Infer Gene Function by Assessing the Significance of Literature Co-Citation JO - PLoS One VL - 8 UR - https://doi.org/10.1371/journal.pone.0074074 DO - 10.1371/journal.pone.0074074 ID - Qiao2013 ER - TY - JOUR AU - Luka, Z. AU - Mudd, S. H. AU - Wagner, C. PY - 2009 DA - 2009// TI - Glycine N-methyltransferase and regulation of S-adenosylmethionine levels JO - J Biol Chem VL - 284 UR - https://doi.org/10.1074/jbc.R109.019273 DO - 10.1074/jbc.R109.019273 ID - Luka2009 ER - TY - JOUR AU - Burdge, G. C. AU - Lillycrop, K. A. PY - 2010 DA - 2010// TI - Nutrition, Epigenetics, and Developmental Plasticity: Implications for Understanding Human Disease JO - Annu Rev Nutr VL - 30 UR - https://doi.org/10.1146/annurev.nutr.012809.104751 DO - 10.1146/annurev.nutr.012809.104751 ID - Burdge2010 ER - TY - JOUR AU - Goll, M. G. PY - 2006 DA - 2006// TI - Methylation of tRNAAsp by the DNA Methyltransferase Homolog Dnmt2 JO - Science VL - 311 UR - https://doi.org/10.1126/science.1120976 DO - 10.1126/science.1120976 ID - Goll2006 ER - TY - JOUR AU - Kiani, J. AU - Grandjean, V. AU - Liebers, R. AU - Tuorto, F. AU - Ghanbarian, H. AU - Lyko, F. AU - Cuzin, F. AU - Rassoulzadegan, M. PY - 2013 DA - 2013// TI - RNA–Mediated Epigenetic Heredity Requires the Cytosine Methyltransferase Dnmt2 JO - PLoS Genet VL - 9 UR - https://doi.org/10.1371/journal.pgen.1003498 DO - 10.1371/journal.pgen.1003498 ID - Kiani2013 ER - TY - JOUR AU - Brenet, F. AU - Moh, M. AU - Funk, P. AU - Feierstein, E. AU - Viale, A. J. AU - Socci, N. D. AU - Scandura, J. M. PY - 2011 DA - 2011// TI - DNA Methylation of the First Exon Is Tightly Linked to Transcriptional Silencing JO - PLoS One VL - 6 UR - https://doi.org/10.1371/journal.pone.0014524 DO - 10.1371/journal.pone.0014524 ID - Brenet2011 ER - TY - BOOK AU - Westerfield, M. PY - 2007 DA - 2007// TI - The Zebrafish Book. A Guide for the Laboratory Use of Zebrafish (Danio Rerio) PB - University of Oregon Press CY - Eugene ID - Westerfield2007 ER - TY - JOUR AU - Robinson, M. D. AU - McCarthy, D. J. AU - Smyth, G. K. PY - 2010 DA - 2010// TI - edgeR: a Bioconductor package for differential expression analysis of digital gene expression data JO - Bioinforma Oxf Engl VL - 26 UR - https://doi.org/10.1093/bioinformatics/btp616 DO - 10.1093/bioinformatics/btp616 ID - Robinson2010 ER - TY - JOUR AU - Linsen, S. E. V. AU - Wit, E. AU - Bruijn, E. AU - Cuppen, E. PY - 2010 DA - 2010// TI - Small RNA expression and strain specificity in the rat JO - BMC Genomics VL - 11 UR - https://doi.org/10.1186/1471-2164-11-249 DO - 10.1186/1471-2164-11-249 ID - Linsen2010 ER - TY - JOUR AU - Schlegel, A. AU - Stainier, D. Y. R. PY - 2006 DA - 2006// TI - Microsomal triglyceride transfer protein is required for yolk lipid utilization and absorption of dietary lipids in zebrafish larvae JO - Biochemistry (Mosc) VL - 45 UR - https://doi.org/10.1021/bi0619268 DO - 10.1021/bi0619268 ID - Schlegel2006 ER - TY - JOUR AU - Trapnell, C. AU - Pachter, L. AU - Salzberg, S. L. PY - 2009 DA - 2009// TI - TopHat: discovering splice junctions with RNA-Seq JO - Bioinforma Oxf Engl VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp120 DO - 10.1093/bioinformatics/btp120 ID - Trapnell2009 ER - TY - JOUR AU - Li, H. AU - Handsaker, B. AU - Wysoker, A. AU - Fennell, T. AU - Ruan, J. AU - Homer, N. AU - Marth, G. AU - Abecasis, G. AU - Durbin, R. PY - 2009 DA - 2009// TI - The Sequence Alignment/Map format and SAMtools JO - Bioinforma Oxf Engl VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp352 DO - 10.1093/bioinformatics/btp352 ID - Li2009 ER - TY - JOUR AU - Quinlan, A. R. AU - Hall, I. M. PY - 2010 DA - 2010// TI - BEDTools: a flexible suite of utilities for comparing genomic features JO - Bioinformatics VL - 26 UR - https://doi.org/10.1093/bioinformatics/btq033 DO - 10.1093/bioinformatics/btq033 ID - Quinlan2010 ER - TY - JOUR AU - Love, M. I. AU - Huber, W. AU - Anders, S. PY - 2014 DA - 2014// TI - Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 JO - Genome Biol VL - 15 UR - https://doi.org/10.1186/s13059-014-0550-8 DO - 10.1186/s13059-014-0550-8 ID - Love2014 ER - TY - JOUR AU - Benjamini, Y. AU - Hochberg, Y. PY - 1995 DA - 1995// TI - Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing JO - J R Stat Soc Ser B Methodol VL - 57 ID - Benjamini1995 ER - TY - JOUR AU - Gautier, L. AU - Cope, L. AU - Bolstad, B. M. PY - 2004 DA - 2004// TI - Irizarry RA: affy–analysis of Affymetrix GeneChip data at the probe level JO - Bioinformatics VL - 20 UR - https://doi.org/10.1093/bioinformatics/btg405 DO - 10.1093/bioinformatics/btg405 ID - Gautier2004 ER - TY - BOOK PY - 2013 DA - 2013// TI - A Language and Environment for Statistical Computing PB - R Foundation for Statistical Computing CY - Vienna, Austria ID - ref48 ER - TY - CHAP AU - Smyth, G. K. ED - Gentleman, R. ED - Carey, V. J. ED - Huber, W. ED - Irizarry, R. A. ED - Dudoit, S. PY - 2013 DA - 2013// TI - Linear Models for Microarray Data BT - Bioinformatics and Computational Biology Solutions Using R and Bioconductor PB - Springer-Verlag CY - New York ID - Smyth2013 ER - TY - JOUR AU - Zhang, B. AU - Kirov, S. AU - Snoddy, J. PY - 2005 DA - 2005// TI - WebGestalt: an integrated system for exploring gene sets in various biological contexts JO - Nucleic Acids Res VL - 33 UR - https://doi.org/10.1093/nar/gki475 DO - 10.1093/nar/gki475 ID - Zhang2005 ER -