Genome-wide transcriptomic analysis of a superior biomass-degrading strain of A. fumigatus revealed active lignocellulose-degrading genes

Table 3 CAZyme gene numbers in A. fumigatus and N. fischeri

Species	CAZyme proteins	GH			GT			CE			PL			CBM			AA
Species	CAZyme proteins	N.	H.	F.	N.	H.	F.	N.	H.	F.	N.	H.	F.	N.	H.	F.	N.	H.	F.
A. fumigatus Z5	528	272	99 %	53	98	98 %	26	69	99 %	9	14	100 %	5	61	97 %	12	55	100 %	10
A. fumigatus AF293	528	269	100 %	53	109	99 %	27	75	100 %	9	15	100 %	6	62	97 %	11	57	100 %	9
A. fumigatus var. RP-2014	498	257	100 %	53	99	100 %	24	68	100 %	9	15	100 %	6	54	96 %	11	50	100 %	9
A. fumigatus A1163	532	270	100 %	53	106	99 %	25	73	99 %	9	15	100 %	6	60	97 %	10	58	100 %	9
N. fischeri NRRL 181	595	304	97 %	54	103	106	25	87	81 %	8	17	88 %	7	78	90 %	12	66	91 %	10

Enzymes: GH, glycoside hydrolase; GT, glycosyltransferase; CE, carbohydrate esterase; PL, polysaccharide lyase; CBM, carbohydrate-binding module; AA, auxiliary activities. Genomes: N. fischeri NRRL 181 (GenBank: AAKE00000000.3); A. fumigatus AF293 (GenBank: AAHF00000000.1); A. fumigatus var. RP-2014 (GenBank: JHOI00000000.1); A. fumigatus A1163 (GenBank: ABDB00000000.1). N.: total numbers of each classes; H.: percentage of homologs compared among these five fungi; F.: family numbers of each classes

ISSN: 1471-2164